On October 31, we will start at 11:00.
The course starts October 17 with a first organizational meeting.
Lecturers: Heike Siebert, Melania Nowicka
Topics: systems biology, boolean modeling, synthetic biology
During the course several smaller group projects need to be conducted and presented to obtain "active participation". The final grade will be given for the project presentation on a case study in modeling and analyzing molecular networks.
| Date | Topic |
|---|---|
| 17.10. | Organization and info |
| 24.10. | Intro systems biology modeling, SBML, BioModels |
| 31.10. | Network structure |
| 07.11. | Software Tutorial I (Cytoscape) |
| 14.11. | BNW I, sea urchin model |
| 21.11. | Software Tutorial II (BoolNet), BNW II |
| 28.11. | Sofware Tutorial III (GinSim), BNW III |
| 05.12. | Case studies/project |
| 12.12. | Short presentations, project |
| 19.12. | Introduction to synthetic biology |
| 09.01. | Synthetic circuit design (Cello) |
| 16.01. | Designing cell classifiers |
| 23.01. | Applications in SynBio, summary |
| 30.01. | Project |
| 06.02. | Final project presentations |
| 13.02. | Feedback |
| Course No | Course Type | Hours |
|---|---|---|
| 19400813 | Praxisseminar | 4 |
| Time Span | 17.10.2018 - 13.02.2019 |
|---|---|
| Instructors |
Heike Siebert
Melania Nowicka
|
| 0089c_MA120 | 2014, MSc Informatik (Mono), 120 LPs |
| 0262b_MA120 | 2012, MSc Bioinformatik (Mono), 120 LPs |
| Day | Time | Location | Details |
|---|---|---|---|
| Wednesday | 10-14 | A6/017 Frontalunterrichtsraum (Bioinf) | 2018-10-17 - 2019-02-13 |