Evento

Bachelor's programme in Bioinformatics

Bachelor's programme in Bioinformatics (2010 study regulations) (0260b_k150)

Module: Computerorientierte Mathematik II (0260bA2.4)

Computer-oriented Mathematics II

LV: 19211901

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2 SWS

Carsten Gräser

Lecture

Submod: 0260bA2.4.1

Akt: 14.04.2020 14:00

Fri, 12:00 - 14:00 (T9/Gr. Hörsaal)

Description

Inhalt:

Die Auswahl der behandelten numerischen Verfahren enthält Polynominterpolation, Newton-Cotes-Formeln zur numerische Integration und Euler-Verfahren für lineare Differentialgleichungen.

Additional information

Studierende der Mathematik (Monobachelor und Lehramt) und Bioinformatik, sowie Numerikinteressierte aus Physik, Informatik und anderen Natur- und Geisteswissenschaften.

Additional appointments

Appointment series

T9/Gr. Hörsaal

Carsten Gräser

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Practice seminar for Computer-oriented Mathematics II

LV: 19211902

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2 SWS

Carsten Gräser

Practice seminar

Submod: 0260bA2.4.2

Akt: 14.04.2020 14:00

Tue, 12:00 - 14:00 (A6/SR 009 Seminarraum)

Tue, 16:00 - 18:00 (KöLu24-26/SR 006 Neuro/Mathe)

Thu, 12:00 - 14:00 (A7/SR 140 Seminarraum (Hinterhaus))

Tue, 12:00 - 14:00 (A3/SR 119)

Tue, 16:00 - 18:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A7/SR 140 Seminarraum (Hinterhaus))

Wed, 16:00 - 18:00 (A3/SR 119)

Additional appointments

Appointment series

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

KöLu24-26/SR 006 Neuro/Mathe

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

Module: Fundamentals of Theoretical Computer Science (0086bA3.1)

Foundations of Theoretical Computer Science

LV: 19301201

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3 SWS

Wolfgang Mulzer

Lecture

Submod: 0086bA3.1.1

Akt: 29.07.2020 21:13

Wed, 10:00 - 12:00 (T9/Gr. Hörsaal)

Mon, 10:00 - 12:00 (T9/Gr. Hörsaal)

Description

Uwe Schöning, Theoretische Informatik kurzgefasst, 5. Auflage, Spektrum Akademischer Verlag, 2008
John E. Hopcroft, Rajeev Motwani, Jeffrey D. Ullman, Einführung in die Automatentheorie, Formale Sprachen und Komplexität, Pearson Studium, 3. Auflage, 2011
Ingo Wegener: Theoretische Informatik - Eine algorithmenorientierte Einführung, 2. Auflage, Teubner, 1999
Michael Sipser, Introduction to the Theory of Computation, 2nd ed., Thomson Course Technology, 2006
Wegener, Kompendium theoretische Informatik - Eine Ideensammlung, Teubner 1996

Additional appointments

Klausur

L 116 Seminarzentrum

Wolfgang Mulzer

20.07.2020 10:00 - 12:00

Nachklausur

Virtueller Raum 01

Wolfgang Mulzer

26.10.2020 10:00 - 12:00

Appointment series

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 15.04.2020, 10:00 - 12:00 (14 Termine)

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Foundations of Theoretical Computer Science

LV: 19301202

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2 SWS

Wolfgang Mulzer

Practice seminar

Submod: 0086bA3.1.2

Akt: 07.04.2020 14:00

Mon, 14:00 - 16:00 (T9/053 Seminarraum)

Thu, 12:00 - 14:00 (T9/051 Seminarraum)

Fri, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 08:00 - 10:00 (T9/051 Seminarraum)

Tue, 14:00 - 16:00 (T9/053 Seminarraum)

Tue, 14:00 - 16:00 (T9/051 Seminarraum)

Tue, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/051 Seminarraum)

Wed, 08:00 - 10:00 (T9/053 Seminarraum)

Mon, 08:00 - 10:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/SR 005 Übungsraum)

Wed, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 14:00 - 16:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 08:00 - 10:00 (12 Termine)

T9/SR 005 Übungsraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Module: Database Systems (0086bA3.3)

Database Systems

LV: 19301501

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3 SWS

Agnès Voisard

Nicolas Lehmann

Lecture

Submod: 0086bA3.3.1

Akt: 21.07.2020 13:17

Thu, 08:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/Gr. Hörsaal)

Tue, 14:00 - 16:00 (T9/Gr. Hörsaal)

Description

Content

Database design with ERM/ERDD. Theoretical foundations of relational database systems: relational algebra, functional dependencies, normal forms. Relational database development: SQL data definitions, foreign keys and other integrity constraints, SQL as applicable language: essential language elements, embedding in programming language. Application programming; object-relational mapping. Security and protection concepts. Transaction subject, transactional guaranties, synchronization of multi user operations, fault tolerance features. Application and new developments: data warehousing, data mining, OLAP.

Project: the topics are deepened in an implementation project for student groups.

References

Alfons Kemper, Andre Eickler: Datenbanksysteme - Eine Einführung, 5. Auflage, Oldenbourg 2004
R. Elmasri, S. Navathe: Grundlagen von Datenbanksystemen, Pearson Studium, 2005

Additional information

Requirements

ALP 1 - Functional Programming
ALP 2 - Object-oriented Programming
ALP 3 - Data structures and data abstractions
OR Informatik B

Additional appointments

Klausur: für den Termin ist die Mensa (Speisesaal Mensa II, Reservierungsnr. FU/328593) reserviert.

Speisesaal Mensa II

Agnès Voisard

Nicolas Lehmann

07.07.2020 14:00 - 16:00

Datenbanksysteme Nachklausur

Virtueller Raum 01

Agnès Voisard

Nicolas Lehmann

03.11.2020 14:00 - 16:00

Appointment series

T9/053 Seminarraum

Agnès Voisard

Nicolas Lehmann

einmal, ab 09.07.2020, 08:00 - 18:00 (2 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Database Systems

LV: 19301502

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2 SWS

Nicolas Lehmann

Practice seminar

Submod: 0086bA3.3.2

Akt: 08.04.2020 12:00

Fri, 14:00 - 16:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/055 Seminarraum)

Fri, 14:00 - 16:00 (T9/055 Seminarraum)

Wed, 16:00 - 18:00 (T9/046 Seminarraum)

Fri, 08:00 - 10:00 (T9/055 Seminarraum)

Fri, 16:00 - 18:00 (T9/049 Seminarraum)

Thu, 16:00 - 18:00 (A7/SR 031)

Wed, 16:00 - 18:00 (A7/SR 031)

Thu, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 16:00 - 18:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/046 Seminarraum

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 08:00 - 10:00 (12 Termine)

T9/049 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/053 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

Bachelor's programme in Bioinformatics (2012 study regulations) (0260c_k150)

Module: Computer Science B (0260cA1.2)

Computer Science B

LV: 19302101

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4 SWS

Max Willert

Lecture

Submod: 0260cA1.2.1

Akt: 20.08.2020 11:08

Thu, 10:00 - 18:00 (T9/049 Seminarraum)

Fri, 08:00 - 10:00 (T9/Gr. Hörsaal)

Wed, 08:00 - 10:00 (T9/Gr. Hörsaal)

Description

The class focuses on:

Fundations of programming: imperative and object-oriented programming
Algorithms and data structures: design and implementation of data structures
theory and comparison of algorithms
graph theory

We use C++ as an implementation language.

Target Audience

Students with Computer Science as a minor concentration and students of bioinformatics.

References

Goodrich, Tamassia: Data Structures and Algorithms in C++
Stroustrup: Die C++ Programmiersprache
Cormen, Leiserson, Rivest, Stein: Introduction to Algorithms
Kleinberg, Tardos: Algorithm Design
Schöning: Algorithmen - kurz gefasst

Additional appointments

Informatik B

Virtueller Raum 01

Max Willert

29.07.2020 08:00 - 10:00

Klausur

Virtueller Raum 13

Max Willert

21.10.2020 08:00 - 10:00

Appointment series

T9/049 Seminarraum

Max Willert

einmal, ab 06.08.2020, 10:00 - 18:00 (2 Termine)

T9/Gr. Hörsaal

Max Willert

einmal, ab 17.04.2020, 08:00 - 10:00 (12 Termine)

T9/Gr. Hörsaal

Max Willert

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Exercise for Computer Science B

LV: 19302102

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2 SWS

Max Willert

Practice seminar

Submod: 0260cA1.2.2

Akt: 08.04.2020 12:00

Fri, 10:00 - 12:00 (T9/051 Seminarraum)

Thu, 12:00 - 14:00 (A6/SR 031 Seminarraum)

Wed, 12:00 - 14:00 (T9/049 Seminarraum)

Fri, 10:00 - 12:00 (T9/049 Seminarraum)

Fri, 12:00 - 14:00 (A7/SR 031)

Tue, 12:00 - 14:00 (A6/SR 031 Seminarraum)

Thu, 10:00 - 12:00 (A6/SR 007/008 Seminarraum)

Tue, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Additional appointments

Appointment series

T9/051 Seminarraum

Max Willert

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

A6/SR 031 Seminarraum

Max Willert

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

T9/049 Seminarraum

Max Willert

einmal, ab 15.04.2020, 12:00 - 14:00 (14 Termine)

T9/049 Seminarraum

Max Willert

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

A7/SR 031

Max Willert

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

A6/SR 031 Seminarraum

Max Willert

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

A6/SR 007/008 Seminarraum

Max Willert

einmal, ab 16.04.2020, 10:00 - 12:00 (13 Termine)

T9/SR 006 Seminarraum

Max Willert

einmal, ab 14.04.2020, 10:00 - 12:00 (14 Termine)

Module: Mathematik für Bioinformatiker II (0260cA2.2)

Mathematics for Bioinformaticians II

LV: 19402201

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4 SWS

Alexander Bockmayr

Heike Siebert

Lecture

Submod: 0260cA2.2.1

Akt: 05.08.2020 09:08

Tue, 14:00 - 16:00 (A3/Hs 001 Hörsaal)

Wed, 10:00 - 12:00 (A3/Hs 001 Hörsaal)

Description

number systems: from natural numbers to real numbers, completeness property of the reals
polynomials: roots of polynomials, polynomial interpolation, rational functions
special functions: exponential function, logarithm, trigonometric functions
complex numbers: exponential function for complex numbers, complex roots
convergence of sequences and series, convergence of functions, continuous functions
differential calculus: derivative of a function, interpretations and applications of the derivative
intergral calculus: definite and indefinite integrals, fundamental theorem of calculus, applications
power series
Taylor series
basics of differential calculus for multivariate functions: partial derivative, gradient, Jacobi matrix
solution of simple differential equations

References

Kurt Meyberg, Peter Vachenauer: Höhere Mathematik 1, Springer-Verlag, 6.Auflage 2001
Dirk Hachenberger: Mathematik für Informatiker, Pearson 2005
Gerhard Berendt: Mathematische Grundlagen der Informatik, Band 2, B.I.-Wissenschaftsverlag; 1990
Thomas Westermann: Mathematik für Ingenieure mit Maple 1, Springer-Verlag, 4.Auflage 2005

Additional information

Target group:

Students of Bioinformatics (BSc, second semester)

Requirements:

Mathematik für Bioinformatiker I

Additional appointments

Prüfung - Mathematik für Bioinformatiker II

A7/SR 031

Alexander Bockmayr

Heike Siebert

29.07.2020 10:00 - 11:00

Klausur

T9/Gr. Hörsaal

Alexander Bockmayr

Heike Siebert

20.10.2020 10:00 - 12:00

Appointment series

A3/Hs 001 Hörsaal

Alexander Bockmayr

Heike Siebert

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

A3/Hs 001 Hörsaal

Alexander Bockmayr

Heike Siebert

einmal, ab 15.04.2020, 10:00 - 12:00 (14 Termine)

Practice seminar for Mathematics for Bioinformaticians II

LV: 19402202

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2 SWS

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

Practice seminar

Submod: 0260cA2.2.2

Akt: 16.07.2020 12:00

Wed, 14:00 - 16:00 (A3/SR 119)

Thu, 08:00 - 10:00 (T9/051 Seminarraum)

Tue, 08:00 - 10:00 (T9/051 Seminarraum)

Fri, 10:00 - 12:00 (T9/055 Seminarraum)

Additional appointments

Appointment series

A3/SR 119

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 16.04.2020, 08:00 - 10:00 (13 Termine)

T9/051 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 14.04.2020, 08:00 - 10:00 (14 Termine)

T9/055 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Module: Computerorientierte Mathematik II (0260cA2.4)

Computer-oriented Mathematics II

LV: 19211901

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2 SWS

Carsten Gräser

Lecture

Submod: 0260bA2.4.1

Akt: 14.04.2020 14:00

Fri, 12:00 - 14:00 (T9/Gr. Hörsaal)

Description

Inhalt:

Die Auswahl der behandelten numerischen Verfahren enthält Polynominterpolation, Newton-Cotes-Formeln zur numerische Integration und Euler-Verfahren für lineare Differentialgleichungen.

Additional information

Studierende der Mathematik (Monobachelor und Lehramt) und Bioinformatik, sowie Numerikinteressierte aus Physik, Informatik und anderen Natur- und Geisteswissenschaften.

Additional appointments

Appointment series

T9/Gr. Hörsaal

Carsten Gräser

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Practice seminar for Computer-oriented Mathematics II

LV: 19211902

a.SAP verarbeitet

2 SWS

Carsten Gräser

Practice seminar

Submod: 0260bA2.4.2

Akt: 14.04.2020 14:00

Tue, 12:00 - 14:00 (A6/SR 009 Seminarraum)

Tue, 16:00 - 18:00 (KöLu24-26/SR 006 Neuro/Mathe)

Thu, 12:00 - 14:00 (A7/SR 140 Seminarraum (Hinterhaus))

Tue, 12:00 - 14:00 (A3/SR 119)

Tue, 16:00 - 18:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A7/SR 140 Seminarraum (Hinterhaus))

Wed, 16:00 - 18:00 (A3/SR 119)

Additional appointments

Appointment series

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

KöLu24-26/SR 006 Neuro/Mathe

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

Module: Statistics for Biosciences II (0260cA2.6)

Statistics II for biosciences

LV: 60100101

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4 SWS

Jochen Kruppa

Lecture

Submod: 0260cA2.6.1

Akt: 06.03.2020 18:00

Mon, 14:00 - 18:00 (A3/Hs 001 Hörsaal)

Practice seminar for Statistics II for biosciences

LV: 60100102

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2 SWS

Jochen Kruppa

Practice seminar

Submod: 0260cA2.6.2

Akt: 06.03.2020 18:00

Tue, 16:00 - 18:00 (T9/049 Seminarraum)

Tue, 16:00 - 18:00 (A3/SR 119)

Tue, 16:00 - 18:00 (T9/046 Seminarraum)

Additional appointments

Appointment series

T9/049 Seminarraum

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A3/SR 119

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

T9/046 Seminarraum

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

Module: Molecular Biology and Biochemistry I (0260cA3.3)

Biochemie I - Grundlagen der Biochemie

LV: 21601a

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2 SWS

Markus Wahl

Florian Heyd

Helge Ewers

Lecture

Submod: 0260cA3.3.1

Akt: 03.07.2023 09:16

Wed, 12:00 - 14:00 (Hs Anorganik)

Description

Qualifikationsziele:
Die Studentinnen und Studenten kennen die Entstehung und molekulare Struktur der wichtigsten zellulären Makromoleküle und Stoffklassen sowie ihren biologischen Kontext. Der Schwerpunkt liegt auf einem chemischen Grundverständnis des molekularen Aufbaus von Biomolekülen.

Inhalte:
Chemische und zellbiologische Grundlagen, Struktur von DNA und RNA, Replikation und Transkription, Proteinbiosynthese, Regulation der Genexpression, gentechnologische Methoden, Aminosäuren und Peptide, Proteinstruktur und Proteinfaltung, Proteom, posttranslationale Modifikationen, Methoden der Proteinforschung, Enzyme, Kohlenhydrate, Lipide und Biomembranen, Einführung in den Stoffwechsel und die Stoffwechselregulation.

Prof. Dr. H. Ewers: helge.ewers@fu-berlin.de
Prof. Dr. F. Heyd: florian.heyd@fu-berlin.de
Prof. Dr. M. Wahl: mwahl@zedat.fu-berlin.de

Additional information for students

Vertonte ppt und/oder Videokonferenz zur regulären Zeit. Entspricht Molekularbiologie und Biochemie I für Bioinformatiker.

Additional appointments

Vorbesprechung

Hs Anorganik

Markus Wahl

Florian Heyd

Helge Ewers

14.04.2020 12:00 - 14:00

Klausur: 21601 - BC I - Grundlagen der Biochemie

Online

Markus Wahl

Florian Heyd

Helge Ewers

04.08.2020 10:00 - 12:00

Nachklausur: 21601 - BC I - Grundlagen der Biochemie

Gr. Hörsaal (Raum B.001)

Markus Wahl

Florian Heyd

Helge Ewers

23.09.2020 10:00 - 12:00

Appointment series

Hs Anorganik

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 15.04.2020, 12:00 - 14:00 (14 Termine)

Übungen zur Biochemie I - Grundlagen der Biochemie

LV: 21601b

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2 SWS

Markus Wahl

Florian Heyd

Helge Ewers

Practice seminar

Submod: 0260cA3.3.2

Akt: 03.07.2023 09:16

Wed, 08:00 - 10:00 (Hs Kristallographie)

Tue, 12:00 - 14:00 (SR 34.16/17Hs KristallographieSR Chemie-64 (Raum B.-132, UG1))

Wed, 10:00 - 12:00 (SR 33.03 SR 34.16/17)

Description

Qualifikationsziele: Die Studentinnen und Studenten kennen die Entstehung und molekulare Struktur der wichtigsten zellulären Makromoleküle und Stoffklassen sowie ihren biologischen Kontext. Der Schwerpunkt liegt auf einem chemischen Grundverständnis des molekularen Aufbaus von Biomolekülen. Inhalte: Chemische und zellbiologische Grundlagen, Struktur von DNA und RNA, Replikation und Transkription, Proteinbiosynthese, Regulation der Genexpression, gentechnologische Methoden, Aminosäuren und Peptide, Proteinstruktur und Proteinfaltung, Proteom, posttranslationale Modifikationen, Methoden der Proteinforschung, Enzyme, Kohlenhydrate, Lipide und Biomembranen, Einführung in den Stoffwechsel und die Stoffwechselregulation. Prof. Dr. H. Ewers: helge.ewers@fu-berlin.de Prof. Dr. F. Heyd: florian.heyd@fu-berlin.de Prof. Dr. M. Wahl: mwahl@zedat.fu-berlin.de

Additional information

Die Übungen finden n.V. in kleineren Gruppen i.d.R. dienstags von 12:00 - 14:00 Uhr bzw. mittwochs von 10:00 - 12:00 Uhr Uhr statt. Die Verteilung findet im Rahmen der Vorbesprechung (s. 21601a) statt.

Additional information for students

Videokonferenz zur regulären Zeit.

Additional appointments

Appointment series

Hs Kristallographie

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 22.04.2020, 08:00 - 10:00 (13 Termine)

SR 34.16/17

Hs Kristallographie

SR Chemie-64 (Raum B.-132, UG1)

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 21.04.2020, 12:00 - 14:00 (13 Termine)

SR 33.03

SR 34.16/17

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 22.04.2020, 10:00 - 12:00 (13 Termine)

Module: Molecular Biology and Biochemistry III (0260cA3.5)

Molekularbiologie und Biochemie III

LV: 21699a

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2 SWS

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

Lecture

Submod: 0260cA3.5.1

Akt: 03.07.2023 09:16

Fri, 10:00 - 12:00 (Hörsaal/Thielallee 67)

Additional information

Qualifikationsziele:
Das in Molekularbiologie und Biochemie II erlangte Grundlagenverständnis wird in den Zusammenhang komplexer biologischer Systeme gestellt. Diese sind:
Verständnis der Rezeptorvermittelten Signaltransduktion und der Regulation von Zellzyklus und Zelltod.
Verständnis der molekularbiologischen und zellbiologischen Eigenschaften von metastasierenden Tumorzellen
Verständnis der Wechselwirkungen von Pathogenen, Wirtszellen und Immunsystem
Verständnis der Prinzipien der DNA-Medizin

Inhalte:
Wachstumsfaktoren, Rezeptoren und Signaltransduktion zur Regulation von Zellzyklus und Zelltod
Grundlagen der Immunologie: angeborene, erworbene Immunabwehr
Antigen-präsentierende Zellen, Effektorzellen
PAMP- und DAMP-Konzepte der Antigen-Prozessierung bei Infektion und Tumor-Bekämpfung
DNA-Medizin und Gentherapie

Additional information for students

Vertonte ppt und/oder Videokonferenz zur regulären Zeit. Vorlesung für Studierende der Bioinformatik

Additional appointments

Klausur - Molekularbiologie und Biochemie III für Bioinformatiker

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

22.07.2020 12:00 - 14:00

Nachklausur - Molekularbiologie und Biochemie III für Bioinformatiker

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

09.10.2020 10:00 - 12:00

Appointment series

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

einmal, ab 24.04.2020, 10:00 - 12:00 (11 Termine)

Übungen zu Molekularbiologie und Biochemie III

LV: 21699b

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2 SWS

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

Practice seminar

Submod: 0260cA3.5.2

Akt: 03.07.2023 09:16

Wed, 12:00 - 14:00 (Hörsaal/Thielallee 67)

Additional information

Additional information for students

Videokonferenz zur regulären Zeit. Übungen zu 21699a für Studierende der Bioinformatik

Additional appointments

Appointment series

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

einmal, ab 29.04.2020, 12:00 - 14:00 (12 Termine)

Module: Medizinische Physiologie (0260cA3.7)

Medical Physiology

LV: 60100201

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2 SWS

No lecturers

Lecture

Submod: 0260cA3.7.1

Akt: 06.03.2020 18:00

Seminar for Medical Physiology

LV: 60100211

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2 SWS

No lecturers

Seminar

Submod: 0260cA3.7.2

Akt: 06.03.2020 18:00

Internship for Medical Physiology

LV: 60100230

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2 SWS

No lecturers

Internship

Submod: 0260cA3.7.3

Akt: 06.03.2020 18:00

Module: Database Systems (0260cA4.1)

Database Systems

LV: 19301501

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3 SWS

Agnès Voisard

Nicolas Lehmann

Lecture

Submod: 0086bA3.3.1

Akt: 21.07.2020 13:17

Thu, 08:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/Gr. Hörsaal)

Tue, 14:00 - 16:00 (T9/Gr. Hörsaal)

Description

Content

Project: the topics are deepened in an implementation project for student groups.

References

Alfons Kemper, Andre Eickler: Datenbanksysteme - Eine Einführung, 5. Auflage, Oldenbourg 2004
R. Elmasri, S. Navathe: Grundlagen von Datenbanksystemen, Pearson Studium, 2005

Additional information

Requirements

ALP 1 - Functional Programming
ALP 2 - Object-oriented Programming
ALP 3 - Data structures and data abstractions
OR Informatik B

Additional appointments

Klausur: für den Termin ist die Mensa (Speisesaal Mensa II, Reservierungsnr. FU/328593) reserviert.

Speisesaal Mensa II

Agnès Voisard

Nicolas Lehmann

07.07.2020 14:00 - 16:00

Datenbanksysteme Nachklausur

Virtueller Raum 01

Agnès Voisard

Nicolas Lehmann

03.11.2020 14:00 - 16:00

Appointment series

T9/053 Seminarraum

Agnès Voisard

Nicolas Lehmann

einmal, ab 09.07.2020, 08:00 - 18:00 (2 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Database Systems

LV: 19301502

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2 SWS

Nicolas Lehmann

Practice seminar

Submod: 0086bA3.3.2

Akt: 08.04.2020 12:00

Fri, 14:00 - 16:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/055 Seminarraum)

Fri, 14:00 - 16:00 (T9/055 Seminarraum)

Wed, 16:00 - 18:00 (T9/046 Seminarraum)

Fri, 08:00 - 10:00 (T9/055 Seminarraum)

Fri, 16:00 - 18:00 (T9/049 Seminarraum)

Thu, 16:00 - 18:00 (A7/SR 031)

Wed, 16:00 - 18:00 (A7/SR 031)

Thu, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 16:00 - 18:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/046 Seminarraum

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 08:00 - 10:00 (12 Termine)

T9/049 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/053 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

Module: Fundamentals of Theoretical Computer Science (0260cA4.2)

Foundations of Theoretical Computer Science

LV: 19301201

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3 SWS

Wolfgang Mulzer

Lecture

Submod: 0086bA3.1.1

Akt: 29.07.2020 21:13

Wed, 10:00 - 12:00 (T9/Gr. Hörsaal)

Mon, 10:00 - 12:00 (T9/Gr. Hörsaal)

Description

Uwe Schöning, Theoretische Informatik kurzgefasst, 5. Auflage, Spektrum Akademischer Verlag, 2008
John E. Hopcroft, Rajeev Motwani, Jeffrey D. Ullman, Einführung in die Automatentheorie, Formale Sprachen und Komplexität, Pearson Studium, 3. Auflage, 2011
Ingo Wegener: Theoretische Informatik - Eine algorithmenorientierte Einführung, 2. Auflage, Teubner, 1999
Michael Sipser, Introduction to the Theory of Computation, 2nd ed., Thomson Course Technology, 2006
Wegener, Kompendium theoretische Informatik - Eine Ideensammlung, Teubner 1996

Additional appointments

Klausur

L 116 Seminarzentrum

Wolfgang Mulzer

20.07.2020 10:00 - 12:00

Nachklausur

Virtueller Raum 01

Wolfgang Mulzer

26.10.2020 10:00 - 12:00

Appointment series

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 15.04.2020, 10:00 - 12:00 (14 Termine)

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Foundations of Theoretical Computer Science

LV: 19301202

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2 SWS

Wolfgang Mulzer

Practice seminar

Submod: 0086bA3.1.2

Akt: 07.04.2020 14:00

Mon, 14:00 - 16:00 (T9/053 Seminarraum)

Thu, 12:00 - 14:00 (T9/051 Seminarraum)

Fri, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 08:00 - 10:00 (T9/051 Seminarraum)

Tue, 14:00 - 16:00 (T9/053 Seminarraum)

Tue, 14:00 - 16:00 (T9/051 Seminarraum)

Tue, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/051 Seminarraum)

Wed, 08:00 - 10:00 (T9/053 Seminarraum)

Mon, 08:00 - 10:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/SR 005 Übungsraum)

Wed, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 14:00 - 16:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 08:00 - 10:00 (12 Termine)

T9/SR 005 Übungsraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Master's programme in Bioinformatics

Master Bioinformatik (StO/PO 2012) (0262b_MA120)

Module: Research Lab (0262bA1.6)

Bioinformatics Research Internship

LV: 19400432

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Katja Nowick

Research Internship

Submod: 0262bA1.6.1

Akt: 07.10.2020 10:00

Module: Netzwerkanalyse (0262bB1.3)

Complex Systems in Bioinformatics

LV: 19405201

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2 SWS

Alexander Bockmayr

Martin Vingron

Lecture

Submod: 0262bB1.3.1

Akt: 19.05.2020 18:00

Mon, 10:00 - 12:00 (A6/SR 007/008 Seminarraum)

Description

Students have acquired a deeper understanding of fundamental mathematical and algorithmic concepts in the field of modeling, simulation and analysis of complex biological systems against the background of current research trends in system biology and biotechnology. They are capable of analyzing a given biological or medical problem, selecting a suitable modeling approach, independently developing a solution and assessing and communicating the results.

Content:

Topics from the following areas are considered in depth:

- Network structure analysis

- Graphical modeling

- Modeling of biochemical networks using standard differential equations

- Discrete modeling of regulatory networks

- Constraint-based modeling

- Stochastic and hybrid modeling

References

wird in der Veranstaltung bekanntgegeben.

Additional appointments

Appointment series

A6/SR 007/008 Seminarraum

Alexander Bockmayr

Martin Vingron

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Complex Systems in Bioinformatics

LV: 19405202

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2 SWS

Alexander Bockmayr

Martin Vingron

Practice seminar

Submod: 0262bB1.3.2

Akt: 19.05.2020 18:00

Fri, 10:00 - 12:00 (T9/SR 005 Übungsraum)

Seminar for Complex Systems in Bioinformatics

LV: 19405211

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2 SWS

Alexander Bockmayr

Martin Vingron

Seminar

Submod: 0262bB1.3.3

Akt: 19.05.2020 18:00

Fri, 12:00 - 14:00 (T9/SR 005 Übungsraum)

Module: Sequenzanalyse (0262bB1.5)

Advanced Algorithms in Bioinformatics

LV: 19405301

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2 SWS

Knut Reinert

Lecture

Submod: 0262bB1.5.1

Akt: 21.09.2020 22:00

Tue, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Algorithms in Bioinformatics

LV: 19405302

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2 SWS

Knut Reinert

Practice seminar

Submod: 0262bB1.5.2

Akt: 06.03.2020 18:00

Thu, 14:00 - 16:00 (T9/055 Seminarraum)

Seminar for Advanced Algorithms in Bioinformatics

LV: 19405311

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2 SWS

Knut Reinert

Seminar

Submod: 0262bB1.5.3

Akt: 06.03.2020 18:00

Fri, 14:00 - 16:00 (A3/019 Seminarraum)

Module: Strukturelle Bioinformatik (0262bB1.6)

Structural Bioinformatcs

LV: 60100501

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2 SWS

No lecturers

Lecture

Submod: 0262bB1.6.1

Akt: 06.03.2020 18:00

Description

Course overview:

This course will take place in the semester break, 8 days during 2 weeks, daily 10 am - 5 pm

The Structural Bioinformatics Group offers a broad and comprehensive set of lectures in the areas of structural bioinformatics and drug design. The course begins with a general introduction of the drug design pipeline and an introductory course on the structural bioinformatics research field. These lead on to more specialized topics, amongst others in chemo-informatics, molecular docking, homology modeling and more detailed aspects of toxicity prediction models.

Structure of the course:

This course consists of eight lecture series. A detailed lecture for a period of 2 hrs on individual topics is delivered in the morning session. Afternoon session consists of an assignment for each topic. This part of the lecture course is assessed by examination, which will take place at the end of the course. Students are asked to delivered a seminar/presentation for 25 minutes, on the topic assigned to them. The material for the examination will be provided in advance, ensuring that the students have required time for preparation.

Topics for lectures are:

1. Introductory session
2. Peptide design
3. Homology modeling
4. 3D Molecular superimposition of small molecules
5. In silico screening, molecular fingerprints and chemical similarity
6. Molecular docking
7. Natural products and fragments based drug discovery
8. In silico toxicity prediction

For further information see: http://bioinf-apache.charite.de/main/course_theoretical.php

Additional information

Zweiwöchiger Blockkurs in den Semesterferien

Additional appointments

Appointment series

Übung zu Strukturelle Bioinformatik

LV: 60100502

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2 SWS

No lecturers

Practice seminar

Submod: 0262bB1.6.2

Akt: 06.03.2020 18:00

Seminar zu Strukturelle Bioinformatik

LV: 60100511

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2 SWS

No lecturers

Seminar

Submod: 0262bB1.6.3

Akt: 06.03.2020 18:00

Module: Current Issues in Cell Physiology (0262bB2.1)

Current topics in cell physiology

LV: 60100613

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4 SWS

No lecturers

Lab Seminar

Submod: 0262bB2.1.1

Akt: 16.02.2021 14:00

Description

Block course during the semester break (two weeks, all day; exact date will be determined by doodle)

Location: Charité Campus Benjamin Franklin (Steglitz, Hindenburgdamm 30), Institut für Klinische Physiologie

For further information: http://klinphys.charite.de/bioinfo/

or mail to Dorothee Günzel

Within this course you will generate structural models of proteins by homology modelling. You will develop hypotheses which amino acids should be decisive for the structure. These Hypotheses will be tested by carrying out molecular biologic experiments (such as site-directed mutagenesis by using two-step PCR). The construct will be cloned into expression vectors, transformed and amplified in bacteria, extracted, sequenced and overexpressed in cultured cells.

These cells will be analyzed in the confocal laser scanning microscope and by other techniques. The results will be evaluated and interpreted in the context of the original hypitheses.

The experimental part will be flanked by seminars introducing the theoretical background and the various techniques.

The exact program of this course depends on the actual research of the institute and is tightly connected to our actual projects.

References

Milatz S, Piontek J, Hempel C, Meoli L, Grohe C, Fromm A, Lee IM, El-Athman R, Günzel D (2017) Tight junction strand formation by claudin-10 isoforms and claudin-10a/-10b chimeras. Ann. N.Y. Acad. Sci. 1405: 102-115 (https://www.ncbi.nlm.nih.gov/pubmed/28633196)

Piontek J, Winkler L, Wolburg H, Müller SL, Zuleger N, Piehl C, Wiesner B, Krause G, Blasig IE (2008) Formation of tight junction: determinants of homophilic interaction between classic claudins. FASEB J. 22: 146-158 (https://www.ncbi.nlm.nih.gov/pubmed/17761522)

Additional information

Please bring lab coat, if available!

Additional appointments

Appointment series

Module: Angewandte Sequenzanalyse (0262bB2.2)

Applied Sequence Analysis

LV: 19400313

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4 SWS

Sandro Andreotti

Lab Seminar

Submod: 0262bB2.2.1

Akt: 22.04.2020 14:00

Mon, 12:00 - 16:00 (A6/017 Frontalunterrichtsraum (Bioinf))

Module: Rechnergestützte Systembiologie (0262bB2.4)

Computational Systems Biology

LV: 19400813

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4 SWS

Heike Siebert

Lab Seminar

Submod: 0262bB2.4.1

Akt: 06.03.2020 18:00

Thu, 10:00 - 14:00 (A6/017 Frontalunterrichtsraum (Bioinf))

Module: Forschungsmodul A (0262bB3.1)

Introduction to Computational Proteomics

LV: 19404511

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2 SWS

Chris Bielow

Seminar

Submod: 0262bB3.1.5

Akt: 14.10.2020 10:00

Fri, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Description

This seminar will cover central aspects of modern bottom-up proteome analysis by mass spectrometry with a focus on bioinformatic algorithms and data analysis.

After a brief introduction to the field of mass spectrometry-based proteomics (instrument types, data properties, overview of bioinformatics challenges) we will explore the big cornerstones, including isotope models and averagines, scoring algorithms for the identification of mass spectra, false-discovery-rate estimation using decoy peptides, absolute and relative quantification of proteins and correlation between mRNA and protein expression.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Chris Bielow

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Computational Meta-Omics

LV: 19404811

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2 SWS

Thilo Muth

Seminar

Submod: 0262bB3.1.5

Akt: 08.06.2020 16:00

Fri, 12:00 - 14:00 (T9/053 Seminarraum)

Description

The growing interest in microbial communities is due to findings that demonstrate the influence of microorganisms on human health. For example, microbiome research investigates the role of intestinal microbiota in diseases such as diabetes and morbus

Crohn or health disorders such as food allergies and obesity. In this context, an imbalanced microbiome is associated with being the cause or the consequence of certain diseases or health disorders. In order to identify and quantify the microorganisms present in experimental samples, meta-omics analyses (e.g. metagenomics, metatranscriptomics, metaproteomics) are conducted that heavily rely on computational strategies from bioinformatics.

The main objectives of this seminar are (1) to introduce both computational and experimental meta-omics methods for analyzing single microbial and microbiome samples with a particular focus on metagenomics and metaproteomics, (2) to provide a general overview on the most commonly employed and recently proposed bioinformatics strategies in the field, and (3) to discuss the shortcomings of current meta-omics approaches in the context of microbiome research and diagnostics of bacteria and viruses.

Additional appointments

Appointment series

T9/053 Seminarraum

Thilo Muth

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Machine Learning in Bioinformatics

LV: 19405701

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2 SWS

Tim Conrad

Lecture

Submod: 0262bB3.1.1

Akt: 19.05.2020 18:00

Wed, 08:00 - 10:00 (T9/SR 006 Seminarraum)

Description

This course provides an overview of central statistical and algorithmic concepts in the field of machine learning in the area of bioinformatics.

Topics will include:

- Regularization methods for variable selections and regression methods for features decorrelation with application to Mass Spectroscopy data and Cancer data
- Support Vector Machines for tumor classification based on genomic data and clinical covariates
- SVMs with string kernels to classify omics data, such as RNA sequences
- Artificial Neural Networks (ANNs) and Deep Learning and some recent applications in bioinformatics
- Graphical models for signal cascade analysis and quasi-species identification
- Active learning with Random Forests applied to modern omics data, such as Mass Specrometry or NGS
- Unsupervised learning: model-based clustering of microRNA expression data

After successful completion of this course, participants are able to classify and apply the learned techniques in the context of current research in bioinformatics, biology and biotechnology. They are able to select suitable methods and models for specific problems and are able to evaluate and communicate the results.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Tim Conrad

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Practice seminar for Machine Learning in Bioinformatics

LV: 19405702

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2 SWS

Tim Conrad

Practice seminar

Submod: 0262bB3.1.3

Akt: 19.05.2020 18:00

Tue, 12:00 - 14:00 (A6/SR 007/008 Seminarraum)

Computer-aided Drug Design - Methods and Application

LV: 60101711

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2 SWS

Andrea Volkamer

Seminar

Submod: 0262bB3.1.5

Akt: 28.04.2020 12:00

Thu, 10:00 - 12:00 (T9/051 Seminarraum)

Description

Introductory seminar to computer-aided drug design, including structure- and ligand-based methods. Briefly, computer-aided drug design uses computational chemistry to discover, enhance, or study drugs and related biologically active molecules. In this seminar, the students will independently acquire knowledge about topics in the context of structural bioinformatics. Topics include homology modelling, target assessment, molecular docking, in-silico screening (molecular fingerprints, chemical similarity), ADME and toxicity predictions (QSAR, machine learning), and more.

The students can select a topic from the presented drug development pipeline and (under guidance) will collect material (papers, data and algorithms). At the end of the seminar, they will present the topic as well as an application of such.

It is advisable/helpful (but not mandatory) to attend the practical course ‘Using open source software and libraries for data analysis and computer-aided drug design’ (Volkamer, WiSe 2016/17, block seminar at the end of february) or ‘Current questions of structural bioinformatics’ (Preissner/Banerjee) before.

The set-up of the course will depend on the number of attending students. Preferably, we will have a bi-weekly meeting (half-day) till mid-June, followed by a weekly presentation round (4 dates à 2 hours) till the end of the semester.

More details will be discussed in a preliminary meeting. Date tbd at Charité, Mitte.

Additional information

For more information see: AG Volkamer - Teaching

Additional appointments

Appointment series

T9/051 Seminarraum

Andrea Volkamer

einmal, ab 30.04.2020, 10:00 - 12:00 (11 Termine)

Advanced Biometrical Methods

LV: 60101901

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2 SWS

Geraldine Rauch

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Thu, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Biometrical Methods

LV: 60101902

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1 SWS

Geraldine Rauch

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Thu, 14:00 - 16:00 (T9/053 Seminarraum)

Statistical Methods for Small Sample Sizes

LV: 60102301

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2 SWS

Frank Konietschke

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Wed, 14:00 - 16:00 (T9/049 Seminarraum)

Description

In this course, we introduce and discuss statistical inference methods for analyzing trials with small sample sizes. We hereby explore the impact of the standard assumption “N is large” and try to find an answer to the question “what means large?” The inference methods will cover estimation of treatment effects, confidence interval computations and hypothesis testing in both parametric and nonparametric models. Rank tests, bootstrap and permutation methods will be investigated in detail as approximation methods. This class aspires to learn about modern statistical tools that were designed to make accurate conclusions when sample sizes are rather small.

Additional appointments

Appointment series

T9/049 Seminarraum

Frank Konietschke

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Statistical Methods for Small Sample Sizes

LV: 60102302

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1 SWS

Frank Konietschke

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Wed, 16:00 - 18:00 (T9/049 Seminarraum)

Complex Data Analysis in Physiology

LV: 60102701

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2 SWS

No lecturers

Lecture

Submod: 0262bB3.1.1

Akt: 06.03.2020 18:00

Description

Class contents comprise theoretical and practical aspects of data acquisition, real-time data processing and automatic pattern recognition in life science.
Topics from the following areas will be addressed:
- Data recording and processing of imaging data in research and clinic (e.g. live cell imaging, super resolution microscopy, imaging methods in medicine)
- Electrophysiological techniques (e.g. impedance spectroscopy, microarrays, EEG, ECG)
- Procedures and applications of automatized pattern recognition (e.g. automatized tumor identification, real-time analysis of biological signals in brain computer interface or in retina implants, individual risk assessment for arrhythmias)

Additional information

Joint course of the Charité Institute of Physiology (CCM) and the Institute of Clinical Physiology (CBF)

Further information at: https://klinphys.charite.de/bioinfo/

Additional appointments

Appointment series

Practice seminar for Complex Data Analysis in Physiology

LV: 60102702

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2 SWS

No lecturers

Practice seminar

Submod: 0262bB3.1.3

Akt: 06.03.2020 18:00

Module: Forschungsmodul B (0262bB3.2)

Introduction to Computational Proteomics

LV: 19404511

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2 SWS

Chris Bielow

Seminar

Submod: 0262bB3.1.5

Akt: 14.10.2020 10:00

Fri, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Description

This seminar will cover central aspects of modern bottom-up proteome analysis by mass spectrometry with a focus on bioinformatic algorithms and data analysis.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Chris Bielow

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Computational Meta-Omics

LV: 19404811

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2 SWS

Thilo Muth

Seminar

Submod: 0262bB3.1.5

Akt: 08.06.2020 16:00

Fri, 12:00 - 14:00 (T9/053 Seminarraum)

Description

Additional appointments

Appointment series

T9/053 Seminarraum

Thilo Muth

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Machine Learning in Bioinformatics

LV: 19405701

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2 SWS

Tim Conrad

Lecture

Submod: 0262bB3.1.1

Akt: 19.05.2020 18:00

Wed, 08:00 - 10:00 (T9/SR 006 Seminarraum)

Description

This course provides an overview of central statistical and algorithmic concepts in the field of machine learning in the area of bioinformatics.

Topics will include:

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Tim Conrad

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Practice seminar for Machine Learning in Bioinformatics

LV: 19405702

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2 SWS

Tim Conrad

Practice seminar

Submod: 0262bB3.1.3

Akt: 19.05.2020 18:00

Tue, 12:00 - 14:00 (A6/SR 007/008 Seminarraum)

Computer-aided Drug Design - Methods and Application

LV: 60101711

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2 SWS

Andrea Volkamer

Seminar

Submod: 0262bB3.1.5

Akt: 28.04.2020 12:00

Thu, 10:00 - 12:00 (T9/051 Seminarraum)

Description

More details will be discussed in a preliminary meeting. Date tbd at Charité, Mitte.

Additional information

For more information see: AG Volkamer - Teaching

Additional appointments

Appointment series

T9/051 Seminarraum

Andrea Volkamer

einmal, ab 30.04.2020, 10:00 - 12:00 (11 Termine)

Advanced Biometrical Methods

LV: 60101901

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2 SWS

Geraldine Rauch

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Thu, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Biometrical Methods

LV: 60101902

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1 SWS

Geraldine Rauch

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Thu, 14:00 - 16:00 (T9/053 Seminarraum)

Statistical Methods for Small Sample Sizes

LV: 60102301

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2 SWS

Frank Konietschke

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Wed, 14:00 - 16:00 (T9/049 Seminarraum)

Description

Additional appointments

Appointment series

T9/049 Seminarraum

Frank Konietschke

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Statistical Methods for Small Sample Sizes

LV: 60102302

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1 SWS

Frank Konietschke

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Wed, 16:00 - 18:00 (T9/049 Seminarraum)

Complex Data Analysis in Physiology

LV: 60102701

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2 SWS

No lecturers

Lecture

Submod: 0262bB3.1.1

Akt: 06.03.2020 18:00

Description

Additional information

Joint course of the Charité Institute of Physiology (CCM) and the Institute of Clinical Physiology (CBF)

Further information at: https://klinphys.charite.de/bioinfo/

Additional appointments

Appointment series

Practice seminar for Complex Data Analysis in Physiology

LV: 60102702

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2 SWS

No lecturers

Practice seminar

Submod: 0262bB3.1.3

Akt: 06.03.2020 18:00

Master Bioinformatik (SPO 2019) (0262c_MA120)

Module: Complex Systems in Bioinformatics (0262cB1.1)

Complex Systems in Bioinformatics

LV: 19405201

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2 SWS

Alexander Bockmayr

Martin Vingron

Lecture

Submod: 0262bB1.3.1

Akt: 19.05.2020 18:00

Mon, 10:00 - 12:00 (A6/SR 007/008 Seminarraum)

Description

Content:

Topics from the following areas are considered in depth:

- Network structure analysis

- Graphical modeling

- Modeling of biochemical networks using standard differential equations

- Discrete modeling of regulatory networks

- Constraint-based modeling

- Stochastic and hybrid modeling

References

wird in der Veranstaltung bekanntgegeben.

Additional appointments

Appointment series

A6/SR 007/008 Seminarraum

Alexander Bockmayr

Martin Vingron

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Complex Systems in Bioinformatics

LV: 19405202

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2 SWS

Alexander Bockmayr

Martin Vingron

Practice seminar

Submod: 0262bB1.3.2

Akt: 19.05.2020 18:00

Fri, 10:00 - 12:00 (T9/SR 005 Übungsraum)

Seminar for Complex Systems in Bioinformatics

LV: 19405211

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2 SWS

Alexander Bockmayr

Martin Vingron

Seminar

Submod: 0262bB1.3.3

Akt: 19.05.2020 18:00

Fri, 12:00 - 14:00 (T9/SR 005 Übungsraum)

Module: Ethics and Policy Questions (0262cB1.3)

Ethics and Policy Questions

LV: 19405413

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2 SWS

Tim Conrad

Jens Peter Fürste

Jochen Kruppa

Lab Seminar

Submod: 0262cB1.3.1

Akt: 10.09.2020 12:00

Thu, 16:00 - 18:00 (T9/SR 005 Übungsraum)

Module: Research Internship (0262cB1.4)

Bioinformatics Research Internship

LV: 19400432

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0 SWS

Katja Nowick

Research Internship

Submod: 0262bA1.6.1

Akt: 07.10.2020 10:00

Module: Current research topics in Complex Systems (0262cB1.5)

Computer-aided Drug Design - Methods and Application

LV: 60101711

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2 SWS

Andrea Volkamer

Seminar

Submod: 0262bB3.1.5

Akt: 28.04.2020 12:00

Thu, 10:00 - 12:00 (T9/051 Seminarraum)

Description

More details will be discussed in a preliminary meeting. Date tbd at Charité, Mitte.

Additional information

For more information see: AG Volkamer - Teaching

Additional appointments

Appointment series

T9/051 Seminarraum

Andrea Volkamer

einmal, ab 30.04.2020, 10:00 - 12:00 (11 Termine)

Module: Human Evolution (0262cB1.7)

V Human Evolution

LV: 23770a

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2 SWS

No lecturers

Lecture

Submod: 0262cB1.7.1

Akt: 03.07.2023 09:16

S I Human Evolution

LV: 23770b

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1 SWS

No lecturers

Seminar

Submod: 0262cB1.7.2

Akt: 03.07.2023 09:16

S II Human Evolution

LV: 23770c

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2 SWS

No lecturers

PC-based Seminar

Submod: 0262cB1.7.3

Akt: 03.07.2023 09:16

Module: Current topics in cell-physiology (0262cB1.11)

Current topics in cell physiology

LV: 60100613

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4 SWS

No lecturers

Lab Seminar

Submod: 0262bB2.1.1

Akt: 16.02.2021 14:00

Description

Block course during the semester break (two weeks, all day; exact date will be determined by doodle)

Location: Charité Campus Benjamin Franklin (Steglitz, Hindenburgdamm 30), Institut für Klinische Physiologie

For further information: http://klinphys.charite.de/bioinfo/

or mail to Dorothee Günzel

These cells will be analyzed in the confocal laser scanning microscope and by other techniques. The results will be evaluated and interpreted in the context of the original hypitheses.

The experimental part will be flanked by seminars introducing the theoretical background and the various techniques.

The exact program of this course depends on the actual research of the institute and is tightly connected to our actual projects.

References

Additional information

Please bring lab coat, if available!

Additional appointments

Appointment series

Module: Computational Systems Biology (0262cB1.12)

Computational Systems Biology

LV: 19400813

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4 SWS

Heike Siebert

Lab Seminar

Submod: 0262bB2.4.1

Akt: 06.03.2020 18:00

Thu, 10:00 - 14:00 (A6/017 Frontalunterrichtsraum (Bioinf))

Module: Data Science in the Life Sciences (0590aB2.1)

Data Science in the Life Sciences

LV: 19405606

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4 SWS

Tim Conrad

Seminar-style instruction

Submod: 0590aB2.1.1

Akt: 06.03.2020 18:00

Tue, 08:00 - 12:00 (T9/SR 005 Übungsraum)

Description

This course offers an introduction to various types of data and analysis techniques which are typically used in the life sciences (e.g. omics technologies). The goal is to get a deeper understanding of advanced concepts and data analytical methods in the area of life sciences.

The focus will be on the following topics:

acquisition and pre-processing of data from the area of life sciences,
explorative analysis techniques,
concepts and tools for reproducible research,
theory and practice of methods and models for the analysis of data from the life sciences (statistical inference, regression models, methods of machine learning),
introduction to methods of big data analysis.

After successful completion of this course, participants are able to evaluate, plan and conduct investigations in the life sciences using common methods.

Additional appointments

Appointment series

T9/SR 005 Übungsraum

Tim Conrad

einmal, ab 21.04.2020, 08:00 - 12:00 (13 Termine)

Project Seminar for Data Science in the Life Sciences

LV: 19405612

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4 SWS

Tim Conrad

Project Seminar

Submod: 0590aB2.1.2

Akt: 06.03.2020 18:00

Wed, 10:00 - 14:00 (A6/SR 031 Seminarraum)

Module: Current research topics in Data Science in Life Sciences (0262cB2.5)

Introduction to Computational Proteomics

LV: 19404511

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2 SWS

Chris Bielow

Seminar

Submod: 0262bB3.1.5

Akt: 14.10.2020 10:00

Fri, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Description

This seminar will cover central aspects of modern bottom-up proteome analysis by mass spectrometry with a focus on bioinformatic algorithms and data analysis.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Chris Bielow

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Computational Meta-Omics

LV: 19404811

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2 SWS

Thilo Muth

Seminar

Submod: 0262bB3.1.5

Akt: 08.06.2020 16:00

Fri, 12:00 - 14:00 (T9/053 Seminarraum)

Description

Additional appointments

Appointment series

T9/053 Seminarraum

Thilo Muth

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Module: Machine Learning in Bioinformatics (0262cB2.6)

Machine Learning in Bioinformatics

LV: 19405701

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2 SWS

Tim Conrad

Lecture

Submod: 0262bB3.1.1

Akt: 19.05.2020 18:00

Wed, 08:00 - 10:00 (T9/SR 006 Seminarraum)

Description

This course provides an overview of central statistical and algorithmic concepts in the field of machine learning in the area of bioinformatics.

Topics will include:

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Tim Conrad

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Practice seminar for Machine Learning in Bioinformatics

LV: 19405702

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2 SWS

Tim Conrad

Practice seminar

Submod: 0262bB3.1.3

Akt: 19.05.2020 18:00

Tue, 12:00 - 14:00 (A6/SR 007/008 Seminarraum)

Module: Complex Data Analysis in Physiology (0262cB2.8)

Complex Data Analysis in Physiology

LV: 60102701

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2 SWS

No lecturers

Lecture

Submod: 0262bB3.1.1

Akt: 06.03.2020 18:00

Description

Additional information

Joint course of the Charité Institute of Physiology (CCM) and the Institute of Clinical Physiology (CBF)

Further information at: https://klinphys.charite.de/bioinfo/

Additional appointments

Appointment series

Practice seminar for Complex Data Analysis in Physiology

LV: 60102702

a.SAP verarbeitet

2 SWS

No lecturers

Practice seminar

Submod: 0262bB3.1.3

Akt: 06.03.2020 18:00

Module: Methodology for clinical trials (0262cB2.9)

Advanced Biometrical Methods

LV: 60101901

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2 SWS

Geraldine Rauch

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Thu, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Biometrical Methods

LV: 60101902

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1 SWS

Geraldine Rauch

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Thu, 14:00 - 16:00 (T9/053 Seminarraum)

Module: Advanced Biometrical Methods (0262cB2.18)

Statistical Methods for Small Sample Sizes

LV: 60102301

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2 SWS

Frank Konietschke

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Wed, 14:00 - 16:00 (T9/049 Seminarraum)

Description

Additional appointments

Appointment series

T9/049 Seminarraum

Frank Konietschke

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Statistical Methods for Small Sample Sizes

LV: 60102302

a.SAP verarbeitet

1 SWS

Frank Konietschke

Practice seminar

Submod: 0262bB3.1.3

Akt: 16.04.2020 12:00

Wed, 16:00 - 18:00 (T9/049 Seminarraum)

Module: Advanced Algorithms for Bioinformatics (0262cB3.1)

Advanced Algorithms in Bioinformatics

LV: 19405301

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2 SWS

Knut Reinert

Lecture

Submod: 0262bB1.5.1

Akt: 21.09.2020 22:00

Tue, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Algorithms in Bioinformatics

LV: 19405302

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2 SWS

Knut Reinert

Practice seminar

Submod: 0262bB1.5.2

Akt: 06.03.2020 18:00

Thu, 14:00 - 16:00 (T9/055 Seminarraum)

Seminar for Advanced Algorithms in Bioinformatics

LV: 19405311

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2 SWS

Knut Reinert

Seminar

Submod: 0262bB1.5.3

Akt: 06.03.2020 18:00

Fri, 14:00 - 16:00 (A3/019 Seminarraum)

Module: Structural Bioinformatics (0262cB3.6)

Structural Bioinformatcs

LV: 60100501

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2 SWS

No lecturers

Lecture

Submod: 0262bB1.6.1

Akt: 06.03.2020 18:00

Description

Course overview:

This course will take place in the semester break, 8 days during 2 weeks, daily 10 am - 5 pm

Structure of the course:

Topics for lectures are:

1. Introductory session
2. Peptide design
3. Homology modeling
4. 3D Molecular superimposition of small molecules
5. In silico screening, molecular fingerprints and chemical similarity
6. Molecular docking
7. Natural products and fragments based drug discovery
8. In silico toxicity prediction

For further information see: http://bioinf-apache.charite.de/main/course_theoretical.php

Additional information

Zweiwöchiger Blockkurs in den Semesterferien

Additional appointments

Appointment series

Übung zu Strukturelle Bioinformatik

LV: 60100502

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2 SWS

No lecturers

Practice seminar

Submod: 0262bB1.6.2

Akt: 06.03.2020 18:00

Seminar zu Strukturelle Bioinformatik

LV: 60100511

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2 SWS

No lecturers

Seminar

Submod: 0262bB1.6.3

Akt: 06.03.2020 18:00

Module: Current research topics in Advanced Algorithms (0262cB3.7)

Introduction to Computational Proteomics

LV: 19404511

a.SAP verarbeitet

2 SWS

Chris Bielow

Seminar

Submod: 0262bB3.1.5

Akt: 14.10.2020 10:00

Fri, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Description

This seminar will cover central aspects of modern bottom-up proteome analysis by mass spectrometry with a focus on bioinformatic algorithms and data analysis.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Chris Bielow

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Module: Applied Sequence Analysis (0262cB3.10)

Applied Sequence Analysis

LV: 19400313

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4 SWS

Sandro Andreotti

Lab Seminar

Submod: 0262bB2.2.1

Akt: 22.04.2020 14:00

Mon, 12:00 - 16:00 (A6/017 Frontalunterrichtsraum (Bioinf))

General Professional Skills

ABV Bioinformatik (0261a_m30)

Module: Legal Aspects of Computer Science (0159cA2.4)

Basics of Data Protection Law

LV: 19307201

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2 SWS

Philip Scholz

Lecture

Submod: 0159cA2.4.1

Akt: 22.04.2020 16:00

Wed, 16:00 - 18:00 (T9/SR 006 Seminarraum)

Description

Content

The lecture is to provide the students with a first structured overview of the German and European Data Protection Law based on the EU General Data Protection Regulation (GDPR). Furthermore, current topics on data protection are being discussed in depth.

Overview of the topics

Historiy of data protection and privacy
European and constitutional legal background
Legislative framework: General Data Protection Regulation, Federal Data Protection Act, sector-specific data protection law
Basic concepts and scope
Principles relating to processing of personal data and lawfulness of processing
Rights of the data subject
Data protection by design and by default, security of processing, data protection impact assessment
Enforcement of data protection law: supervisory system, sanctions
Focal points: big data, profiling, social networks, smart video surveillance, processing in the context of employment

Additional information

The exact date will be announced.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Philip Scholz

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

Practice seminar for Basics of Data Protection Law

LV: 19307202

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2 SWS

Philip Scholz

Practice seminar

Submod: 0159cA2.4.2

Akt: 22.04.2020 16:00

Wed, 18:00 - 19:00 (T9/SR 006 Seminarraum)

Module: Planning, Implementing and Analysing a Tutorial in Computer Science (0159cA2.5)

Planning, Realisation and Analysis of a Tutorial

LV: 19302613

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2 SWS

No lecturers

Lab Seminar

Submod: 0159cA2.5.1

Akt: 06.03.2020 16:00

Description

Content

In a preparatory colloquium, current teaching methods and advising for tutors are presented and discussed. This colloquium is specifically for students, which particularly want to guide exercise sessions as a tutor for the mathematics and computer science students. An interview with the selection committee will take place even during the holidays, in which will be decided about the suitability as a tutor.

After successful aptitude assessment a tutorial about a subjects of a lecture of the first four semesters bachelor study, should be prepare, expose, documented and analyzed.

References

Seifert, J. W.: Visualisieren Präsentieren Moderieren. GABAL Verlag, 16. Auflage 2001

Additional information

Time and location by appointment.

Additional appointments

Appointment series

Module: System Administration (0159cA2.7)

System Administration

LV: 19302201

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2 SWS

Rolf Dietze

Lecture

Submod: 0159cA2.7.1

Akt: 22.04.2020 16:00

Mon, 10:00 - 18:00 (T9/046 Seminarraum)

Description

shell scripting from the viewpoint of system administration
planning and setting up a computer system while taking availability and maintainability into consideration (RAS-conditions)
redundancy in networking and storage
planning and setting up a redundant storage system (Raid-technologies and management)
system administration, security and user management, accounting and logging
managing configuration files and documentation
backups - strategies and technologies
planning and realization of networkwide services and resources (e.g. file services, print services, network information services)
implementation on different platforms (AIX, Solaris)
partitioning, virtualization and resource management on modern systems supporting logical partitioning
virtualization and resource management at the operating systems level (workload partitions, zones, jails)
qualitative comparison of partitioning and virtualization techniques on PowerPC and Sparc based UNI*-systems.
delegation of administration tasks with rolebased access (RBAC)
ethical and legal aspects when dealing with administrative privileges,
special aspects and procedures when dealing with personal information and security clearances when dealing with vital systems

At the beginning of the class, we will refresh the necessary knowledge to participate in the practical exercises and we will set up a working environment in the context of the administration of a heterogeneous computer network. Previous experience is desirable.

Additional information

The class will be taught as a block course, from 26.9. to 14.10.2016, daily from 10:00 to 18:00. Details will be announced in due time.

Additional appointments

Appointment series

T9/046 Seminarraum

Rolf Dietze

einmal, ab 14.09.2020, 10:00 - 18:00 (15 Termine)

Internship for System Administration

LV: 19302230

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3 SWS

No lecturers

Internship

Submod: 0159cA2.7.2

Akt: 22.04.2020 16:00

Module: General Professional Skills III (subject-related) (5 CP) (0261aA1.23)

Women in the History of Mathematics and Computer Science

LV: 19234810

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2 SWS

Anina Mischau

Proseminar

Submod: 0261aA1.23.1

Akt: 17.02.2021 12:00

Tue, 14:00 - 16:00 (T9/046 Seminarraum)

Tue, 14:00 - 16:00 ()

Description

The seminar focuses on the development and rediscovery of the life stories and the work of some important mathematicians and computer scientists in the 19th and 20th centuries. The life and work of Sophie Germaine (1776-1831), Ada Lovelace (1815-1852), Sonja Kovalevskaya (1850-1891), Emmy Noether (1882-1935), Ruth Moufang (1905-1977), Grace Murray Hopper (1906-1992) and other female scientists are examined.

The seminar is not about highlighting these women as an exception, because it would only set them on their exotic status. Rather, it is about a historical contextualization of their life and work. This not only enables an exemplary examination of social and cultural inclusion and exclusion processes along the gender category, but also the development of new perspectives on the traditional cultural history of both disciplines. The seminar is based on the approach of researching or discovering learning, i.e. the students will independently prepare and present individual seminar topics in group work. These presentations will then be discussed in the seminar. Through the use of observation sheets, a feedback culture is also to be tested that will be helpful in dealing with pupils and/or colleagues in later professional life.

Additional information

For mathematicians and computer scientists in a monobachelor's degree, creditable as ABV!

Additional appointments

Appointment series

T9/046 Seminarraum

Anina Mischau

einmal, ab 28.04.2020, 14:00 - 16:00 (5 Termine)

Anina Mischau

einmal, ab 12.05.2020, 14:00 - 16:00 (5 Termine)

Module: Berufspraktikum (0261aA2.1)

Bioinformatics Internship

LV: 19402433

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0 SWS

No lecturers

Professional Internship

Submod: 0261aA2.1.1

Akt: 06.03.2020 18:00

Module: Principles of Business Administration (0105dA4.1)

Betriebswirtschaftliche Grundlagen (ABV)

LV: 109001

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4 SWS

Janina Sundermeier

Catharina Werner

Seminar

Submod: 0105dA4.1.1

Akt: 03.07.2023 09:16

Tue, 10:00 - 12:00 (Hs 104a Hörsaal)

Tue, 12:00 - 14:00 (Hs 102 Hörsaal)

Tue, 12:00 - 14:00 (Hs 103 Hörsaal)

Tue, 14:00 - 16:00 (Hs 102 Hörsaal)

Tue, 14:00 - 16:00 (Hs 103 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 104a Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 10:00 - 12:00 (14 Termine)

Hs 102 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

Hs 103 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

Hs 102 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Hs 103 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Module: Principles of Marketing (0105dA4.2)

Marketing-Grundlagen (ABV)

LV: 109003

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4 SWS

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

Seminar

Submod: 0105dA4.2.1

Akt: 03.07.2023 09:16

Wed, 10:00 - 12:00 (Hs 105 Hörsaal)

Fri, 10:00 - 14:30 ()

Thu, 10:00 - 12:00 (Hs 104 Hörsaal)

Thu, 12:00 - 14:00 (Hs 103 Hörsaal)

Wed, 12:00 - 14:00 (Hs 104 Hörsaal)

Wed, 14:00 - 16:00 (Hs 103 Hörsaal)

Thu, 14:00 - 16:00 (Hs 101 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 105 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 10:00 - 12:00 (5 Termine)

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 24.04.2020, 10:00 - 14:30 (4 Termine)

Hs 104 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 10:00 - 12:00 (5 Termine)

Hs 103 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 12:00 - 14:00 (5 Termine)

Hs 104 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 12:00 - 14:00 (5 Termine)

Hs 103 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 14:00 - 16:00 (5 Termine)

Hs 101 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 14:00 - 16:00 (5 Termine)

Module: E-Business (0105dA4.3)

E-Business (ABV)

LV: 109020

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4 SWS

Martin Gersch

Lars Stegemann

Alexa Danelski

Seminar

Submod: 0105dA4.3.1

Akt: 03.07.2023 09:16

Wed, 16:00 - 18:00 (Hs 106 Hörsaal)

Wed, 14:00 - 16:00 (Hs 106 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 106 Hörsaal

Martin Gersch

Lars Stegemann

Alexa Danelski

einmal, ab 22.04.2020, 16:00 - 18:00 (13 Termine)

Hs 106 Hörsaal

Martin Gersch

Lars Stegemann

Alexa Danelski

einmal, ab 22.04.2020, 14:00 - 16:00 (13 Termine)

ABV Bioinformatik (für Studierende, die nach der BSc STO/PO 2012 studieren) (0261b_m30)

Module: Principles of Business Administration (0105dA4.1)

Betriebswirtschaftliche Grundlagen (ABV)

LV: 109001

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4 SWS

Janina Sundermeier

Catharina Werner

Seminar

Submod: 0105dA4.1.1

Akt: 03.07.2023 09:16

Tue, 10:00 - 12:00 (Hs 104a Hörsaal)

Tue, 12:00 - 14:00 (Hs 102 Hörsaal)

Tue, 12:00 - 14:00 (Hs 103 Hörsaal)

Tue, 14:00 - 16:00 (Hs 102 Hörsaal)

Tue, 14:00 - 16:00 (Hs 103 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 104a Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 10:00 - 12:00 (14 Termine)

Hs 102 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

Hs 103 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

Hs 102 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Hs 103 Hörsaal

Janina Sundermeier

Catharina Werner

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Module: Principles of Marketing (0105dA4.2)

Marketing-Grundlagen (ABV)

LV: 109003

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4 SWS

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

Seminar

Submod: 0105dA4.2.1

Akt: 03.07.2023 09:16

Wed, 10:00 - 12:00 (Hs 105 Hörsaal)

Fri, 10:00 - 14:30 ()

Thu, 10:00 - 12:00 (Hs 104 Hörsaal)

Thu, 12:00 - 14:00 (Hs 103 Hörsaal)

Wed, 12:00 - 14:00 (Hs 104 Hörsaal)

Wed, 14:00 - 16:00 (Hs 103 Hörsaal)

Thu, 14:00 - 16:00 (Hs 101 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 105 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 10:00 - 12:00 (5 Termine)

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 24.04.2020, 10:00 - 14:30 (4 Termine)

Hs 104 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 10:00 - 12:00 (5 Termine)

Hs 103 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 12:00 - 14:00 (5 Termine)

Hs 104 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 12:00 - 14:00 (5 Termine)

Hs 103 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 22.04.2020, 14:00 - 16:00 (5 Termine)

Hs 101 Hörsaal

Gunnar Mau

Manuel Schild

Catharina Werner

Catalina Wache

einmal, ab 23.04.2020, 14:00 - 16:00 (5 Termine)

Module: E-Business (0105dA4.3)

E-Business (ABV)

LV: 109020

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4 SWS

Martin Gersch

Lars Stegemann

Alexa Danelski

Seminar

Submod: 0105dA4.3.1

Akt: 03.07.2023 09:16

Wed, 16:00 - 18:00 (Hs 106 Hörsaal)

Wed, 14:00 - 16:00 (Hs 106 Hörsaal)

Description

Zu den Kommentaren der Veranstaltung

Additional appointments

Appointment series

Hs 106 Hörsaal

Martin Gersch

Lars Stegemann

Alexa Danelski

einmal, ab 22.04.2020, 16:00 - 18:00 (13 Termine)

Hs 106 Hörsaal

Martin Gersch

Lars Stegemann

Alexa Danelski

einmal, ab 22.04.2020, 14:00 - 16:00 (13 Termine)

Module: Project Management in the Software Area (0261bA1.1)

Seminar for Software Project Management (Synthetic Biology)

LV: 19402011

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 10.06.2020 16:00

Software Project Management (Synthetic Biology)

LV: 19402013

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 10.06.2020 16:00

Seminar zu Projektmanagement im Softwarebereich (Functional Genomics with R)

LV: 19402511

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 02.03.2021 14:00

Software Project Management (Functional Genomics)

LV: 19402513

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 21.01.2021 12:00

Description

Integrative analysis of next generation sequencing (NGS) data
One of the research questions in bioinformatics and regulatory genomics is to understand the principles of transcriptional regulation. Transcription factors are the main players of gene regulation. Another aspect accounts for the open chromatin which enables the binding of the transcription factors and the RNA Polymerase II. There are several experimental techniques which can determine the interaction of the regulatory proteins and the DNA, such as ChIP-seq. Combinatorical analysis of several experiments help us to understand the interplay of all these factors on regulatory elements in the genome. We will analyze ChIP-seq and RNA-seq data in various cell lines to model the TF binding and histone modifications across the genome with respect to gene expression of the neighbouring genes. Afterwards, we develop a statistical method to combine these data in an appropriate way. We will use both implemented tools and our own scripts to obtain suitable results. Students will work in groups of 3 and present their work at the end of the seminar.

Additional information

The allocation of seats takes place every year in February.

Additional appointments

Appointment series

Seminar for Software Project Management (OpenMS)

LV: 19403411

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Software Project Management (OpenMS)

LV: 19403413

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Workflows)

LV: 19404311

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 29.04.2020 00:00

Software Project Management (Workflows)

LV: 19404313

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4 SWS

Sandro Andreotti

Lab Seminar

Submod: 0261bA1.1.1

Akt: 10.09.2020 18:00

Description

Information on the software internship can be found at Bioinformatics homepage.

In this internship realistic workflows for the analysis of biological data are designed and implemented. The participants will get to know and use different workflow systems (KNIME, Snakemake). The participants will develop, test and refine their workflows on the basis of current literature. Knowledge in the context of workflow programming as well as extensive knowledge of existing bioinformatics software is acquired. Good knowledge of scripting languages (Python) and R is required.

Additional appointments

Vorbesprechung

T9/055 Seminarraum

Sandro Andreotti

26.02.2020 14:00 - 16:00

Appointment series

Seminar zu Projektmanagement im Softwarebereich (Preißner)

LV: 60100311

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Preißner)

LV: 60100313

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Analyse von Genexpressionsprofilen)

LV: 60101611

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Analyse von Genexpressionsprofilen)

LV: 60101613

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Structural Alignment)

LV: 60102611

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Structural Alignment)

LV: 60102613

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (AI for Health)

LV: 60102811

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (AI for Health)

LV: 60102813

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Bioinformatische Aufklärung monogener Krankheiten)

LV: 60102911

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Bioinformatische Aufklärung monogener Krankheiten)

LV: 60102913

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Bioinformatics Software Engineering)

LV: 60103011

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Software Project Management (Bioinformatics Software Engineering)

LV: 60103013

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Module: Legal Aspects of Computer Science (0159cA2.4)

Basics of Data Protection Law

LV: 19307201

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2 SWS

Philip Scholz

Lecture

Submod: 0159cA2.4.1

Akt: 22.04.2020 16:00

Wed, 16:00 - 18:00 (T9/SR 006 Seminarraum)

Description

Content

Overview of the topics

Historiy of data protection and privacy
European and constitutional legal background
Legislative framework: General Data Protection Regulation, Federal Data Protection Act, sector-specific data protection law
Basic concepts and scope
Principles relating to processing of personal data and lawfulness of processing
Rights of the data subject
Data protection by design and by default, security of processing, data protection impact assessment
Enforcement of data protection law: supervisory system, sanctions
Focal points: big data, profiling, social networks, smart video surveillance, processing in the context of employment

Additional information

The exact date will be announced.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Philip Scholz

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

Practice seminar for Basics of Data Protection Law

LV: 19307202

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2 SWS

Philip Scholz

Practice seminar

Submod: 0159cA2.4.2

Akt: 22.04.2020 16:00

Wed, 18:00 - 19:00 (T9/SR 006 Seminarraum)

Module: Planning, Implementing and Analysing a Tutorial in Computer Science (0159cA2.5)

Planning, Realisation and Analysis of a Tutorial

LV: 19302613

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2 SWS

No lecturers

Lab Seminar

Submod: 0159cA2.5.1

Akt: 06.03.2020 16:00

Description

Content

After successful aptitude assessment a tutorial about a subjects of a lecture of the first four semesters bachelor study, should be prepare, expose, documented and analyzed.

References

Seifert, J. W.: Visualisieren Präsentieren Moderieren. GABAL Verlag, 16. Auflage 2001

Additional information

Time and location by appointment.

Additional appointments

Appointment series

Module: System Administration (0159cA2.7)

System Administration

LV: 19302201

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2 SWS

Rolf Dietze

Lecture

Submod: 0159cA2.7.1

Akt: 22.04.2020 16:00

Mon, 10:00 - 18:00 (T9/046 Seminarraum)

Description

shell scripting from the viewpoint of system administration
planning and setting up a computer system while taking availability and maintainability into consideration (RAS-conditions)
redundancy in networking and storage
planning and setting up a redundant storage system (Raid-technologies and management)
system administration, security and user management, accounting and logging
managing configuration files and documentation
backups - strategies and technologies
planning and realization of networkwide services and resources (e.g. file services, print services, network information services)
implementation on different platforms (AIX, Solaris)
partitioning, virtualization and resource management on modern systems supporting logical partitioning
virtualization and resource management at the operating systems level (workload partitions, zones, jails)
qualitative comparison of partitioning and virtualization techniques on PowerPC and Sparc based UNI*-systems.
delegation of administration tasks with rolebased access (RBAC)
ethical and legal aspects when dealing with administrative privileges,
special aspects and procedures when dealing with personal information and security clearances when dealing with vital systems

Additional information

The class will be taught as a block course, from 26.9. to 14.10.2016, daily from 10:00 to 18:00. Details will be announced in due time.

Additional appointments

Appointment series

T9/046 Seminarraum

Rolf Dietze

einmal, ab 14.09.2020, 10:00 - 18:00 (15 Termine)

Internship for System Administration

LV: 19302230

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3 SWS

No lecturers

Internship

Submod: 0159cA2.7.2

Akt: 22.04.2020 16:00

Module: General Professional Skills III (subject-related) (5 CP) (0261bA2.10)

Women in the History of Mathematics and Computer Science

LV: 19234810

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2 SWS

Anina Mischau

Proseminar

Submod: 0261aA1.23.1

Akt: 17.02.2021 12:00

Tue, 14:00 - 16:00 (T9/046 Seminarraum)

Tue, 14:00 - 16:00 ()

Description

Additional information

For mathematicians and computer scientists in a monobachelor's degree, creditable as ABV!

Additional appointments

Appointment series

T9/046 Seminarraum

Anina Mischau

einmal, ab 28.04.2020, 14:00 - 16:00 (5 Termine)

Anina Mischau

einmal, ab 12.05.2020, 14:00 - 16:00 (5 Termine)

Module: Professional Internship (0261bA3.1)

Bioinformatics Internship

LV: 19402433

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0 SWS

No lecturers

Professional Internship

Submod: 0261aA2.1.1

Akt: 06.03.2020 18:00

Gesamtes Lehrangebot der Bioinformatik

Gesamtes Lehrangebot der Bioinformatik (E61a)

Module: Gesamtes Lehrangebot der Bioinformatik (E61aA1.1)

Computer-oriented Mathematics II

LV: 19211901

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2 SWS

Carsten Gräser

Lecture

Submod: 0260bA2.4.1

Akt: 14.04.2020 14:00

Fri, 12:00 - 14:00 (T9/Gr. Hörsaal)

Description

Inhalt:

Die Auswahl der behandelten numerischen Verfahren enthält Polynominterpolation, Newton-Cotes-Formeln zur numerische Integration und Euler-Verfahren für lineare Differentialgleichungen.

Additional information

Studierende der Mathematik (Monobachelor und Lehramt) und Bioinformatik, sowie Numerikinteressierte aus Physik, Informatik und anderen Natur- und Geisteswissenschaften.

Additional appointments

Appointment series

T9/Gr. Hörsaal

Carsten Gräser

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Practice seminar for Computer-oriented Mathematics II

LV: 19211902

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2 SWS

Carsten Gräser

Practice seminar

Submod: 0260bA2.4.2

Akt: 14.04.2020 14:00

Tue, 12:00 - 14:00 (A6/SR 009 Seminarraum)

Tue, 16:00 - 18:00 (KöLu24-26/SR 006 Neuro/Mathe)

Thu, 12:00 - 14:00 (A7/SR 140 Seminarraum (Hinterhaus))

Tue, 12:00 - 14:00 (A3/SR 119)

Tue, 16:00 - 18:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A6/SR 009 Seminarraum)

Wed, 14:00 - 16:00 (A7/SR 140 Seminarraum (Hinterhaus))

Wed, 16:00 - 18:00 (A3/SR 119)

Additional appointments

Appointment series

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

KöLu24-26/SR 006 Neuro/Mathe

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A6/SR 009 Seminarraum

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A7/SR 140 Seminarraum (Hinterhaus)

Carsten Gräser

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

A3/SR 119

Carsten Gräser

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

Women in the History of Mathematics and Computer Science

LV: 19234810

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2 SWS

Anina Mischau

Proseminar

Submod: 0261aA1.23.1

Akt: 17.02.2021 12:00

Tue, 14:00 - 16:00 (T9/046 Seminarraum)

Tue, 14:00 - 16:00 ()

Description

Additional information

For mathematicians and computer scientists in a monobachelor's degree, creditable as ABV!

Additional appointments

Appointment series

T9/046 Seminarraum

Anina Mischau

einmal, ab 28.04.2020, 14:00 - 16:00 (5 Termine)

Anina Mischau

einmal, ab 12.05.2020, 14:00 - 16:00 (5 Termine)

Foundations of Theoretical Computer Science

LV: 19301201

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3 SWS

Wolfgang Mulzer

Lecture

Submod: 0086bA3.1.1

Akt: 29.07.2020 21:13

Wed, 10:00 - 12:00 (T9/Gr. Hörsaal)

Mon, 10:00 - 12:00 (T9/Gr. Hörsaal)

Description

Uwe Schöning, Theoretische Informatik kurzgefasst, 5. Auflage, Spektrum Akademischer Verlag, 2008
John E. Hopcroft, Rajeev Motwani, Jeffrey D. Ullman, Einführung in die Automatentheorie, Formale Sprachen und Komplexität, Pearson Studium, 3. Auflage, 2011
Ingo Wegener: Theoretische Informatik - Eine algorithmenorientierte Einführung, 2. Auflage, Teubner, 1999
Michael Sipser, Introduction to the Theory of Computation, 2nd ed., Thomson Course Technology, 2006
Wegener, Kompendium theoretische Informatik - Eine Ideensammlung, Teubner 1996

Additional appointments

Klausur

L 116 Seminarzentrum

Wolfgang Mulzer

20.07.2020 10:00 - 12:00

Nachklausur

Virtueller Raum 01

Wolfgang Mulzer

26.10.2020 10:00 - 12:00

Appointment series

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 15.04.2020, 10:00 - 12:00 (14 Termine)

T9/Gr. Hörsaal

Wolfgang Mulzer

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Foundations of Theoretical Computer Science

LV: 19301202

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2 SWS

Wolfgang Mulzer

Practice seminar

Submod: 0086bA3.1.2

Akt: 07.04.2020 14:00

Mon, 14:00 - 16:00 (T9/053 Seminarraum)

Thu, 12:00 - 14:00 (T9/051 Seminarraum)

Fri, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 08:00 - 10:00 (T9/051 Seminarraum)

Tue, 14:00 - 16:00 (T9/053 Seminarraum)

Tue, 14:00 - 16:00 (T9/051 Seminarraum)

Tue, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/051 Seminarraum)

Wed, 08:00 - 10:00 (T9/053 Seminarraum)

Mon, 08:00 - 10:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/SR 005 Übungsraum)

Wed, 14:00 - 16:00 (T9/053 Seminarraum)

Wed, 14:00 - 16:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 20.04.2020, 08:00 - 10:00 (12 Termine)

T9/SR 005 Übungsraum

Wolfgang Mulzer

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/053 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Wolfgang Mulzer

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

Database Systems

LV: 19301501

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3 SWS

Agnès Voisard

Nicolas Lehmann

Lecture

Submod: 0086bA3.3.1

Akt: 21.07.2020 13:17

Thu, 08:00 - 18:00 (T9/053 Seminarraum)

Thu, 14:00 - 16:00 (T9/Gr. Hörsaal)

Tue, 14:00 - 16:00 (T9/Gr. Hörsaal)

Description

Content

Project: the topics are deepened in an implementation project for student groups.

References

Alfons Kemper, Andre Eickler: Datenbanksysteme - Eine Einführung, 5. Auflage, Oldenbourg 2004
R. Elmasri, S. Navathe: Grundlagen von Datenbanksystemen, Pearson Studium, 2005

Additional information

Requirements

ALP 1 - Functional Programming
ALP 2 - Object-oriented Programming
ALP 3 - Data structures and data abstractions
OR Informatik B

Additional appointments

Klausur: für den Termin ist die Mensa (Speisesaal Mensa II, Reservierungsnr. FU/328593) reserviert.

Speisesaal Mensa II

Agnès Voisard

Nicolas Lehmann

07.07.2020 14:00 - 16:00

Datenbanksysteme Nachklausur

Virtueller Raum 01

Agnès Voisard

Nicolas Lehmann

03.11.2020 14:00 - 16:00

Appointment series

T9/053 Seminarraum

Agnès Voisard

Nicolas Lehmann

einmal, ab 09.07.2020, 08:00 - 18:00 (2 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 16.04.2020, 14:00 - 16:00 (13 Termine)

T9/Gr. Hörsaal

Agnès Voisard

Nicolas Lehmann

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

Practice seminar for Database Systems

LV: 19301502

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2 SWS

Nicolas Lehmann

Practice seminar

Submod: 0086bA3.3.2

Akt: 08.04.2020 12:00

Fri, 14:00 - 16:00 (T9/051 Seminarraum)

Fri, 16:00 - 18:00 (T9/055 Seminarraum)

Fri, 14:00 - 16:00 (T9/055 Seminarraum)

Wed, 16:00 - 18:00 (T9/046 Seminarraum)

Fri, 08:00 - 10:00 (T9/055 Seminarraum)

Fri, 16:00 - 18:00 (T9/049 Seminarraum)

Thu, 16:00 - 18:00 (A7/SR 031)

Wed, 16:00 - 18:00 (A7/SR 031)

Thu, 16:00 - 18:00 (T9/053 Seminarraum)

Thu, 16:00 - 18:00 (T9/051 Seminarraum)

Additional appointments

Appointment series

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 14:00 - 16:00 (12 Termine)

T9/046 Seminarraum

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/055 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 08:00 - 10:00 (12 Termine)

T9/049 Seminarraum

Nicolas Lehmann

einmal, ab 17.04.2020, 16:00 - 18:00 (12 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

A7/SR 031

Nicolas Lehmann

einmal, ab 15.04.2020, 16:00 - 18:00 (14 Termine)

T9/053 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

T9/051 Seminarraum

Nicolas Lehmann

einmal, ab 16.04.2020, 16:00 - 18:00 (13 Termine)

Computer Science B

LV: 19302101

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4 SWS

Max Willert

Lecture

Submod: 0260cA1.2.1

Akt: 20.08.2020 11:08

Thu, 10:00 - 18:00 (T9/049 Seminarraum)

Fri, 08:00 - 10:00 (T9/Gr. Hörsaal)

Wed, 08:00 - 10:00 (T9/Gr. Hörsaal)

Description

The class focuses on:

Fundations of programming: imperative and object-oriented programming
Algorithms and data structures: design and implementation of data structures
theory and comparison of algorithms
graph theory

We use C++ as an implementation language.

Target Audience

Students with Computer Science as a minor concentration and students of bioinformatics.

References

Goodrich, Tamassia: Data Structures and Algorithms in C++
Stroustrup: Die C++ Programmiersprache
Cormen, Leiserson, Rivest, Stein: Introduction to Algorithms
Kleinberg, Tardos: Algorithm Design
Schöning: Algorithmen - kurz gefasst

Additional appointments

Informatik B

Virtueller Raum 01

Max Willert

29.07.2020 08:00 - 10:00

Klausur

Virtueller Raum 13

Max Willert

21.10.2020 08:00 - 10:00

Appointment series

T9/049 Seminarraum

Max Willert

einmal, ab 06.08.2020, 10:00 - 18:00 (2 Termine)

T9/Gr. Hörsaal

Max Willert

einmal, ab 17.04.2020, 08:00 - 10:00 (12 Termine)

T9/Gr. Hörsaal

Max Willert

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Exercise for Computer Science B

LV: 19302102

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2 SWS

Max Willert

Practice seminar

Submod: 0260cA1.2.2

Akt: 08.04.2020 12:00

Fri, 10:00 - 12:00 (T9/051 Seminarraum)

Thu, 12:00 - 14:00 (A6/SR 031 Seminarraum)

Wed, 12:00 - 14:00 (T9/049 Seminarraum)

Fri, 10:00 - 12:00 (T9/049 Seminarraum)

Fri, 12:00 - 14:00 (A7/SR 031)

Tue, 12:00 - 14:00 (A6/SR 031 Seminarraum)

Thu, 10:00 - 12:00 (A6/SR 007/008 Seminarraum)

Tue, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Additional appointments

Appointment series

T9/051 Seminarraum

Max Willert

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

A6/SR 031 Seminarraum

Max Willert

einmal, ab 16.04.2020, 12:00 - 14:00 (13 Termine)

T9/049 Seminarraum

Max Willert

einmal, ab 15.04.2020, 12:00 - 14:00 (14 Termine)

T9/049 Seminarraum

Max Willert

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

A7/SR 031

Max Willert

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

A6/SR 031 Seminarraum

Max Willert

einmal, ab 14.04.2020, 12:00 - 14:00 (14 Termine)

A6/SR 007/008 Seminarraum

Max Willert

einmal, ab 16.04.2020, 10:00 - 12:00 (13 Termine)

T9/SR 006 Seminarraum

Max Willert

einmal, ab 14.04.2020, 10:00 - 12:00 (14 Termine)

Applied Sequence Analysis

LV: 19400313

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4 SWS

Sandro Andreotti

Lab Seminar

Submod: 0262bB2.2.1

Akt: 22.04.2020 14:00

Mon, 12:00 - 16:00 (A6/017 Frontalunterrichtsraum (Bioinf))

Bioinformatics Research Internship

LV: 19400432

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0 SWS

Katja Nowick

Research Internship

Submod: 0262bA1.6.1

Akt: 07.10.2020 10:00

Computational Systems Biology

LV: 19400813

a.SAP verarbeitet

4 SWS

Heike Siebert

Lab Seminar

Submod: 0262bB2.4.1

Akt: 06.03.2020 18:00

Thu, 10:00 - 14:00 (A6/017 Frontalunterrichtsraum (Bioinf))

Seminar for Software Project Management (Synthetic Biology)

LV: 19402011

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 10.06.2020 16:00

Software Project Management (Synthetic Biology)

LV: 19402013

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 10.06.2020 16:00

Mathematics for Bioinformaticians II

LV: 19402201

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4 SWS

Alexander Bockmayr

Heike Siebert

Lecture

Submod: 0260cA2.2.1

Akt: 05.08.2020 09:08

Tue, 14:00 - 16:00 (A3/Hs 001 Hörsaal)

Wed, 10:00 - 12:00 (A3/Hs 001 Hörsaal)

Description

number systems: from natural numbers to real numbers, completeness property of the reals
polynomials: roots of polynomials, polynomial interpolation, rational functions
special functions: exponential function, logarithm, trigonometric functions
complex numbers: exponential function for complex numbers, complex roots
convergence of sequences and series, convergence of functions, continuous functions
differential calculus: derivative of a function, interpretations and applications of the derivative
intergral calculus: definite and indefinite integrals, fundamental theorem of calculus, applications
power series
Taylor series
basics of differential calculus for multivariate functions: partial derivative, gradient, Jacobi matrix
solution of simple differential equations

References

Kurt Meyberg, Peter Vachenauer: Höhere Mathematik 1, Springer-Verlag, 6.Auflage 2001
Dirk Hachenberger: Mathematik für Informatiker, Pearson 2005
Gerhard Berendt: Mathematische Grundlagen der Informatik, Band 2, B.I.-Wissenschaftsverlag; 1990
Thomas Westermann: Mathematik für Ingenieure mit Maple 1, Springer-Verlag, 4.Auflage 2005

Additional information

Target group:

Students of Bioinformatics (BSc, second semester)

Requirements:

Mathematik für Bioinformatiker I

Additional appointments

Prüfung - Mathematik für Bioinformatiker II

A7/SR 031

Alexander Bockmayr

Heike Siebert

29.07.2020 10:00 - 11:00

Klausur

T9/Gr. Hörsaal

Alexander Bockmayr

Heike Siebert

20.10.2020 10:00 - 12:00

Appointment series

A3/Hs 001 Hörsaal

Alexander Bockmayr

Heike Siebert

einmal, ab 14.04.2020, 14:00 - 16:00 (14 Termine)

A3/Hs 001 Hörsaal

Alexander Bockmayr

Heike Siebert

einmal, ab 15.04.2020, 10:00 - 12:00 (14 Termine)

Practice seminar for Mathematics for Bioinformaticians II

LV: 19402202

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2 SWS

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

Practice seminar

Submod: 0260cA2.2.2

Akt: 16.07.2020 12:00

Wed, 14:00 - 16:00 (A3/SR 119)

Thu, 08:00 - 10:00 (T9/051 Seminarraum)

Tue, 08:00 - 10:00 (T9/051 Seminarraum)

Fri, 10:00 - 12:00 (T9/055 Seminarraum)

Additional appointments

Appointment series

A3/SR 119

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 15.04.2020, 14:00 - 16:00 (14 Termine)

T9/051 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 16.04.2020, 08:00 - 10:00 (13 Termine)

T9/051 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 14.04.2020, 08:00 - 10:00 (14 Termine)

T9/055 Seminarraum

Alexander Bockmayr

Heike Siebert

Frederik Laszlo Wieder

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Bioinformatics Internship

LV: 19402433

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0 SWS

No lecturers

Professional Internship

Submod: 0261aA2.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Functional Genomics with R)

LV: 19402511

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 02.03.2021 14:00

Software Project Management (Functional Genomics)

LV: 19402513

a.SAP verarbeitet

4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 21.01.2021 12:00

Description

Additional information

The allocation of seats takes place every year in February.

Additional appointments

Appointment series

Seminar for Software Project Management (OpenMS)

LV: 19403411

a.SAP verarbeitet

1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Software Project Management (OpenMS)

LV: 19403413

a.SAP verarbeitet

4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Workflows)

LV: 19404311

a.SAP verarbeitet

1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 29.04.2020 00:00

Software Project Management (Workflows)

LV: 19404313

a.SAP verarbeitet

4 SWS

Sandro Andreotti

Lab Seminar

Submod: 0261bA1.1.1

Akt: 10.09.2020 18:00

Description

Information on the software internship can be found at Bioinformatics homepage.

Additional appointments

Vorbesprechung

T9/055 Seminarraum

Sandro Andreotti

26.02.2020 14:00 - 16:00

Appointment series

Introduction to Computational Proteomics

LV: 19404511

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2 SWS

Chris Bielow

Seminar

Submod: 0262bB3.1.5

Akt: 14.10.2020 10:00

Fri, 10:00 - 12:00 (T9/SR 006 Seminarraum)

Description

This seminar will cover central aspects of modern bottom-up proteome analysis by mass spectrometry with a focus on bioinformatic algorithms and data analysis.

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Chris Bielow

einmal, ab 17.04.2020, 10:00 - 12:00 (12 Termine)

Computational Meta-Omics

LV: 19404811

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2 SWS

Thilo Muth

Seminar

Submod: 0262bB3.1.5

Akt: 08.06.2020 16:00

Fri, 12:00 - 14:00 (T9/053 Seminarraum)

Description

Additional appointments

Appointment series

T9/053 Seminarraum

Thilo Muth

einmal, ab 17.04.2020, 12:00 - 14:00 (12 Termine)

Complex Systems in Bioinformatics

LV: 19405201

a.SAP verarbeitet

2 SWS

Alexander Bockmayr

Martin Vingron

Lecture

Submod: 0262bB1.3.1

Akt: 19.05.2020 18:00

Mon, 10:00 - 12:00 (A6/SR 007/008 Seminarraum)

Description

Content:

Topics from the following areas are considered in depth:

- Network structure analysis

- Graphical modeling

- Modeling of biochemical networks using standard differential equations

- Discrete modeling of regulatory networks

- Constraint-based modeling

- Stochastic and hybrid modeling

References

wird in der Veranstaltung bekanntgegeben.

Additional appointments

Appointment series

A6/SR 007/008 Seminarraum

Alexander Bockmayr

Martin Vingron

einmal, ab 20.04.2020, 10:00 - 12:00 (12 Termine)

Practice seminar for Complex Systems in Bioinformatics

LV: 19405202

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2 SWS

Alexander Bockmayr

Martin Vingron

Practice seminar

Submod: 0262bB1.3.2

Akt: 19.05.2020 18:00

Fri, 10:00 - 12:00 (T9/SR 005 Übungsraum)

Seminar for Complex Systems in Bioinformatics

LV: 19405211

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2 SWS

Alexander Bockmayr

Martin Vingron

Seminar

Submod: 0262bB1.3.3

Akt: 19.05.2020 18:00

Fri, 12:00 - 14:00 (T9/SR 005 Übungsraum)

Advanced Algorithms in Bioinformatics

LV: 19405301

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2 SWS

Knut Reinert

Lecture

Submod: 0262bB1.5.1

Akt: 21.09.2020 22:00

Tue, 12:00 - 14:00 (T9/053 Seminarraum)

Practice seminar for Advanced Algorithms in Bioinformatics

LV: 19405302

a.SAP verarbeitet

2 SWS

Knut Reinert

Practice seminar

Submod: 0262bB1.5.2

Akt: 06.03.2020 18:00

Thu, 14:00 - 16:00 (T9/055 Seminarraum)

Seminar for Advanced Algorithms in Bioinformatics

LV: 19405311

a.SAP verarbeitet

2 SWS

Knut Reinert

Seminar

Submod: 0262bB1.5.3

Akt: 06.03.2020 18:00

Fri, 14:00 - 16:00 (A3/019 Seminarraum)

Ethics and Policy Questions

LV: 19405413

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2 SWS

Tim Conrad

Jens Peter Fürste

Jochen Kruppa

Lab Seminar

Submod: 0262cB1.3.1

Akt: 10.09.2020 12:00

Thu, 16:00 - 18:00 (T9/SR 005 Übungsraum)

Data Science in the Life Sciences

LV: 19405606

a.SAP verarbeitet

4 SWS

Tim Conrad

Seminar-style instruction

Submod: 0590aB2.1.1

Akt: 06.03.2020 18:00

Tue, 08:00 - 12:00 (T9/SR 005 Übungsraum)

Description

The focus will be on the following topics:

acquisition and pre-processing of data from the area of life sciences,
explorative analysis techniques,
concepts and tools for reproducible research,
theory and practice of methods and models for the analysis of data from the life sciences (statistical inference, regression models, methods of machine learning),
introduction to methods of big data analysis.

After successful completion of this course, participants are able to evaluate, plan and conduct investigations in the life sciences using common methods.

Additional appointments

Appointment series

T9/SR 005 Übungsraum

Tim Conrad

einmal, ab 21.04.2020, 08:00 - 12:00 (13 Termine)

Project Seminar for Data Science in the Life Sciences

LV: 19405612

a.SAP verarbeitet

4 SWS

Tim Conrad

Project Seminar

Submod: 0590aB2.1.2

Akt: 06.03.2020 18:00

Wed, 10:00 - 14:00 (A6/SR 031 Seminarraum)

Machine Learning in Bioinformatics

LV: 19405701

a.SAP verarbeitet

2 SWS

Tim Conrad

Lecture

Submod: 0262bB3.1.1

Akt: 19.05.2020 18:00

Wed, 08:00 - 10:00 (T9/SR 006 Seminarraum)

Description

This course provides an overview of central statistical and algorithmic concepts in the field of machine learning in the area of bioinformatics.

Topics will include:

Additional appointments

Appointment series

T9/SR 006 Seminarraum

Tim Conrad

einmal, ab 15.04.2020, 08:00 - 10:00 (14 Termine)

Practice seminar for Machine Learning in Bioinformatics

LV: 19405702

a.SAP verarbeitet

2 SWS

Tim Conrad

Practice seminar

Submod: 0262bB3.1.3

Akt: 19.05.2020 18:00

Tue, 12:00 - 14:00 (A6/SR 007/008 Seminarraum)

Biochemie I - Grundlagen der Biochemie

LV: 21601a

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2 SWS

Markus Wahl

Florian Heyd

Helge Ewers

Lecture

Submod: 0260cA3.3.1

Akt: 03.07.2023 09:16

Wed, 12:00 - 14:00 (Hs Anorganik)

Description

Additional information for students

Vertonte ppt und/oder Videokonferenz zur regulären Zeit. Entspricht Molekularbiologie und Biochemie I für Bioinformatiker.

Additional appointments

Vorbesprechung

Hs Anorganik

Markus Wahl

Florian Heyd

Helge Ewers

14.04.2020 12:00 - 14:00

Klausur: 21601 - BC I - Grundlagen der Biochemie

Online

Markus Wahl

Florian Heyd

Helge Ewers

04.08.2020 10:00 - 12:00

Nachklausur: 21601 - BC I - Grundlagen der Biochemie

Gr. Hörsaal (Raum B.001)

Markus Wahl

Florian Heyd

Helge Ewers

23.09.2020 10:00 - 12:00

Appointment series

Hs Anorganik

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 15.04.2020, 12:00 - 14:00 (14 Termine)

Übungen zur Biochemie I - Grundlagen der Biochemie

LV: 21601b

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2 SWS

Markus Wahl

Florian Heyd

Helge Ewers

Practice seminar

Submod: 0260cA3.3.2

Akt: 03.07.2023 09:16

Wed, 08:00 - 10:00 (Hs Kristallographie)

Tue, 12:00 - 14:00 (SR 34.16/17Hs KristallographieSR Chemie-64 (Raum B.-132, UG1))

Wed, 10:00 - 12:00 (SR 33.03 SR 34.16/17)

Description

Additional information

Additional information for students

Videokonferenz zur regulären Zeit.

Additional appointments

Appointment series

Hs Kristallographie

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 22.04.2020, 08:00 - 10:00 (13 Termine)

SR 34.16/17

Hs Kristallographie

SR Chemie-64 (Raum B.-132, UG1)

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 21.04.2020, 12:00 - 14:00 (13 Termine)

SR 33.03

SR 34.16/17

Markus Wahl

Florian Heyd

Helge Ewers

einmal, ab 22.04.2020, 10:00 - 12:00 (13 Termine)

Molekularbiologie und Biochemie III

LV: 21699a

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2 SWS

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

Lecture

Submod: 0260cA3.5.1

Akt: 03.07.2023 09:16

Fri, 10:00 - 12:00 (Hörsaal/Thielallee 67)

Additional information

Additional information for students

Vertonte ppt und/oder Videokonferenz zur regulären Zeit. Vorlesung für Studierende der Bioinformatik

Additional appointments

Klausur - Molekularbiologie und Biochemie III für Bioinformatiker

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

22.07.2020 12:00 - 14:00

Nachklausur - Molekularbiologie und Biochemie III für Bioinformatiker

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

09.10.2020 10:00 - 12:00

Appointment series

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

einmal, ab 24.04.2020, 10:00 - 12:00 (11 Termine)

Übungen zu Molekularbiologie und Biochemie III

LV: 21699b

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2 SWS

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

Practice seminar

Submod: 0260cA3.5.2

Akt: 03.07.2023 09:16

Wed, 12:00 - 14:00 (Hörsaal/Thielallee 67)

Additional information

Additional information for students

Videokonferenz zur regulären Zeit. Übungen zu 21699a für Studierende der Bioinformatik

Additional appointments

Appointment series

Hörsaal/Thielallee 67

Sigmar Stricker

Sutapa Chakrabarti

Ursula Neu

einmal, ab 29.04.2020, 12:00 - 14:00 (12 Termine)

Statistics II for biosciences

LV: 60100101

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4 SWS

Jochen Kruppa

Lecture

Submod: 0260cA2.6.1

Akt: 06.03.2020 18:00

Mon, 14:00 - 18:00 (A3/Hs 001 Hörsaal)

Practice seminar for Statistics II for biosciences

LV: 60100102

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2 SWS

Jochen Kruppa

Practice seminar

Submod: 0260cA2.6.2

Akt: 06.03.2020 18:00

Tue, 16:00 - 18:00 (T9/049 Seminarraum)

Tue, 16:00 - 18:00 (A3/SR 119)

Tue, 16:00 - 18:00 (T9/046 Seminarraum)

Additional appointments

Appointment series

T9/049 Seminarraum

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

A3/SR 119

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

T9/046 Seminarraum

Jochen Kruppa

einmal, ab 14.04.2020, 16:00 - 18:00 (14 Termine)

Medical Physiology

LV: 60100201

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2 SWS

No lecturers

Lecture

Submod: 0260cA3.7.1

Akt: 06.03.2020 18:00

Seminar for Medical Physiology

LV: 60100211

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2 SWS

No lecturers

Seminar

Submod: 0260cA3.7.2

Akt: 06.03.2020 18:00

Internship for Medical Physiology

LV: 60100230

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2 SWS

No lecturers

Internship

Submod: 0260cA3.7.3

Akt: 06.03.2020 18:00

Seminar zu Projektmanagement im Softwarebereich (Preißner)

LV: 60100311

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Preißner)

LV: 60100313

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Structural Bioinformatcs

LV: 60100501

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2 SWS

No lecturers

Lecture

Submod: 0262bB1.6.1

Akt: 06.03.2020 18:00

Description

Course overview:

This course will take place in the semester break, 8 days during 2 weeks, daily 10 am - 5 pm

Structure of the course:

Topics for lectures are:

1. Introductory session
2. Peptide design
3. Homology modeling
4. 3D Molecular superimposition of small molecules
5. In silico screening, molecular fingerprints and chemical similarity
6. Molecular docking
7. Natural products and fragments based drug discovery
8. In silico toxicity prediction

For further information see: http://bioinf-apache.charite.de/main/course_theoretical.php

Additional information

Zweiwöchiger Blockkurs in den Semesterferien

Additional appointments

Appointment series

Übung zu Strukturelle Bioinformatik

LV: 60100502

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2 SWS

No lecturers

Practice seminar

Submod: 0262bB1.6.2

Akt: 06.03.2020 18:00

Seminar zu Strukturelle Bioinformatik

LV: 60100511

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2 SWS

No lecturers

Seminar

Submod: 0262bB1.6.3

Akt: 06.03.2020 18:00

Current topics in cell physiology

LV: 60100613

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4 SWS

No lecturers

Lab Seminar

Submod: 0262bB2.1.1

Akt: 16.02.2021 14:00

Description

Block course during the semester break (two weeks, all day; exact date will be determined by doodle)

Location: Charité Campus Benjamin Franklin (Steglitz, Hindenburgdamm 30), Institut für Klinische Physiologie

For further information: http://klinphys.charite.de/bioinfo/

or mail to Dorothee Günzel

These cells will be analyzed in the confocal laser scanning microscope and by other techniques. The results will be evaluated and interpreted in the context of the original hypitheses.

The experimental part will be flanked by seminars introducing the theoretical background and the various techniques.

The exact program of this course depends on the actual research of the institute and is tightly connected to our actual projects.

References

Additional information

Please bring lab coat, if available!

Additional appointments

Appointment series

Seminar zu Projektmanagement im Softwarebereich (Analyse von Genexpressionsprofilen)

LV: 60101611

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1 SWS

No lecturers

Seminar

Submod: 0261bA1.1.2

Akt: 06.03.2020 18:00

Projektmanagement im Softwarebereich (Analyse von Genexpressionsprofilen)

LV: 60101613

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4 SWS

No lecturers

Lab Seminar

Submod: 0261bA1.1.1

Akt: 06.03.2020 18:00

Computer-aided Drug Design - Methods and Application

LV: 60101711

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2 SWS

Andrea Volkamer

Seminar

Submod: 0262bB3.1.5

Akt: 28.04.2020 12:00

Thu, 10:00 - 12:00 (T9/051 Seminarraum)

Description

More details will be discussed in a preliminary meeting. Date tbd at Charité, Mitte.

Additional information

For more information see: AG Volkamer - Teaching

Additional appointments

Appointment series

T9/051 Seminarraum

Andrea Volkamer

einmal, ab 30.04.2020, 10:00 - 12:00 (11 Termine)

Advanced Biometrical Methods

LV: 60101901

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2 SWS

Geraldine Rauch

Lecture

Submod: 0262bB3.1.1

Akt: 16.04.2020 12:00

Thu, 12:00 - 14:00 (T9/053 Seminarraum)

Bachelor's programme in Bioinformatics

Bachelor's programme in Bioinformatics (2010 study regulations) (0260b_k150)

Module: Computerorientierte Mathematik II (0260bA2.4)

Inhalt:

Module: Fundamentals of Theoretical Computer Science (0086bA3.1)

Contents:

Module: Database Systems (0086bA3.3)

Content

Requirements

Bachelor's programme in Bioinformatics (2012 study regulations) (0260c_k150)

Module: Computer Science B (0260cA1.2)

Contents

Target Audience

Module: Mathematik für Bioinformatiker II (0260cA2.2)

Contents:

Target group:

Requirements:

Module: Computerorientierte Mathematik II (0260cA2.4)

Inhalt:

Module: Statistics for Biosciences II (0260cA2.6)

Module: Molecular Biology and Biochemistry I (0260cA3.3)

Module: Molecular Biology and Biochemistry III (0260cA3.5)

Module: Medizinische Physiologie (0260cA3.7)

Module: Database Systems (0260cA4.1)

Content

Requirements

Module: Fundamentals of Theoretical Computer Science (0260cA4.2)

Contents:

Master's programme in Bioinformatics

Master Bioinformatik (StO/PO 2012) (0262b_MA120)

Module: Research Lab (0262bA1.6)

Module: Netzwerkanalyse (0262bB1.3)

Module: Sequenzanalyse (0262bB1.5)

Module: Strukturelle Bioinformatik (0262bB1.6)

Course overview:

Structure of the course:

Topics for lectures are:

Module: Current Issues in Cell Physiology (0262bB2.1)

Module: Angewandte Sequenzanalyse (0262bB2.2)

Goals:

Module: Rechnergestützte Systembiologie (0262bB2.4)

Content:

Target group:

Module: Forschungsmodul A (0262bB3.1)

Module: Forschungsmodul B (0262bB3.2)

Master Bioinformatik (SPO 2019) (0262c_MA120)

Module: Complex Systems in Bioinformatics (0262cB1.1)

Module: Ethics and Policy Questions (0262cB1.3)

Module: Research Internship (0262cB1.4)

Module: Current research topics in Complex Systems (0262cB1.5)

Module: Human Evolution (0262cB1.7)

Module: Current topics in cell-physiology (0262cB1.11)

Module: Computational Systems Biology (0262cB1.12)

Content:

Target group:

Module: Data Science in the Life Sciences (0590aB2.1)

Module: Current research topics in Data Science in Life Sciences (0262cB2.5)

Module: Machine Learning in Bioinformatics (0262cB2.6)

Module: Complex Data Analysis in Physiology (0262cB2.8)

Module: Methodology for clinical trials (0262cB2.9)

Module: Advanced Biometrical Methods (0262cB2.18)

Module: Advanced Algorithms for Bioinformatics (0262cB3.1)

Module: Structural Bioinformatics (0262cB3.6)

Course overview:

Structure of the course:

Topics for lectures are:

Module: Current research topics in Advanced Algorithms (0262cB3.7)

Module: Applied Sequence Analysis (0262cB3.10)

Goals:

General Professional Skills

ABV Bioinformatik (0261a_m30)

Module: Legal Aspects of Computer Science (0159cA2.4)

Content

Overview of the topics

Module: Planning, Implementing and Analysing a Tutorial in Computer Science (0159cA2.5)

Content

Module: System Administration (0159cA2.7)

Contents

Module: General Professional Skills III (subject-related) (5 CP) (0261aA1.23)

Module: Berufspraktikum (0261aA2.1)